Kluyvera cryocrescens: RIN60_00020
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Entry
RIN60_00020 CDS
T09399
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
kcy
Kluyvera cryocrescens
Brite
KEGG Orthology (KO) [BR:
kcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kcy03032
]
RIN60_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
kcy03400
]
RIN60_00020 (gyrB)
Enzymes [BR:
kcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RIN60_00020 (gyrB)
DNA replication proteins [BR:
kcy03032
]
Prokaryotic type
DNA Topoisomerases
RIN60_00020 (gyrB)
DNA repair and recombination proteins [BR:
kcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RIN60_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
WNN71794
LinkDB
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Position
3813..6227
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AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDIV
VTIHSDNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIQRDNKIHKQIYAHGVPQAPLAVTGDTEKTGTMVRFWPSYETFTNVI
EFEYDILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVEQQMNELLSEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPAHSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHTNAHAPALAGEALEKLVAEFNGTQKMIHRMERR
FPKALLKELIYQPTLVEADLSDEQKVTRWVNTLVSELNEKEQHGSQWKFDVRENVEQQQF
EPIIRVRTHGVDTDYPLDNEFVTGGEYRRICTLGEKLRGLVEEDAFIERGERRQPVASFE
QALDWLVKESRRGLSIQRYKGLGEMNPDQLWETTMDPDSRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaaggactggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatggta
ttcgaggttgtggataacgctatcgacgaagcgctcgcagggtactgtaaagacatcgtt
gtcaccatccatagcgataactccgtatccgtacaggatgacggtcgtggtatcccaacc
ggtattcacccggaagagggcgtatcggcggcggaagtgatcatgaccgttctgcacgca
ggcggtaaatttgatgataactcctacaaagtttccggtggtctgcacggcgtcggcgtg
tcggttgtaaacgccctgtcgcagaagctggaactggttatccagcgcgataacaaaatc
cacaaacagatttatgcgcacggcgtgccgcaggctccgctagcggttactggcgatacc
gagaaaaccggtactatggtgcgtttctggccgagctacgaaaccttcaccaatgtcatt
gaattcgaatatgacattctggcaaaacgcctgcgcgagctgtcattcctgaactccggc
gtgtctatccgtctgcgcgataagcgcgacggcaaagaagatcatttccactacgaaggt
ggcatcaaggcatttgttgaatatctcaacaaaaacaaaacgccaatccacccaaatatc
ttctacttctccaccgaaaaagacggtatcggcgttgaagtggcgctgcagtggaacgat
ggtttccaggaaaacatctactgctttaccaacaacattccacagcgtgacggtggtact
caccttgccggcttccgtgcggcgatgacccgtacgctgaacgcctacatggacaaagaa
ggctacagtaaaaaagcgaaagtcagcgccaccggcgatgatgctcgtgaaggcctgatt
gccgtggtttctgtgaaagtgccggatccgaagttctcctcacagaccaaagataaactg
gtttcttctgaggtgaaaacggcagttgagcagcagatgaacgaactgctgagcgaatac
ctgctggaaaacccatccgacgccaagatcgttgtgggcaaaattattgacgctgcgcgt
gctcgtgaagcggcccgccgtgcgcgtgaaatgactcgccgtaaaggtgcgctggactta
gccggcctgccgggcaaactggcggactgccaggaacgcgacccagcccactctgaactg
taccttgtggaaggggactctgcgggcggctctgcaaaacaggggcgtaaccgtaagaac
caggccattctgccgctgaagggtaaaatcctgaacgttgagaaggcgcgcttcgacaag
atgctctcttctcaggaagtggcaacgctgatcactgcgctgggctgcggtatcggtcgc
gatgagtacaacccggataaactgcgctatcacagcatcatcatcatgaccgatgcggat
gtcgacggctcgcacattcgtacgctgctgttgaccttcttctatcgtcagatgccagaa
atcgttgaacgtggccacgtctacattgcacagccaccgctgtacaaagtgaaaaaaggc
aaacaggaacagtacatcaaagacgatgaagcaatggatcaataccagatctccattgcc
cttgatggcgcaacgctgcacaccaatgctcacgctccggctctggcgggtgaagcgctg
gaaaaactggttgccgagttcaacggtacgcagaaaatgatccatcgtatggagcgtcgt
ttcccgaaagcgctgctgaaagagcttatctatcagccaacgctggtggaagccgatctc
tccgacgagcaaaaagtgacccgctgggtgaacaccctggtttccgagctgaacgagaaa
gagcagcacggcagccagtggaaatttgatgttcgcgaaaacgttgaacagcagcagttc
gaaccgattatccgcgtccgtacccacggcgttgataccgattatccgctggataatgag
ttcgtgaccggcggtgaataccgccgcatctgcacgctgggtgagaaactgcgtggcctg
gtggaagaagacgcgttcattgaacgtggcgagcgccgtcagccggttgccagcttcgag
caggcgctggactggttggtgaaagagtcccgccgtggcctctccattcagcgttataaa
ggtctgggagaaatgaacccagatcagctgtgggaaaccaccatggacccagatagccgc
cgcatgctgcgcgtcaccgtgaaagatgcgattgctgctgaccagctgttcaccaccctg
atgggcgacgccgttgaaccgcgtcgtgcgtttatcgaagagaacgccctgaaagcggcg
aacatcgatatctaa
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