Kluyvera cryocrescens: RIN60_02805
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Entry
RIN60_02805 CDS
T09399
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kcy
Kluyvera cryocrescens
Pathway
kcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RIN60_02805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kcy03019
]
RIN60_02805
03009 Ribosome biogenesis [BR:
kcy03009
]
RIN60_02805
Enzymes [BR:
kcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RIN60_02805
Messenger RNA biogenesis [BR:
kcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RIN60_02805
Ribosome biogenesis [BR:
kcy03009
]
Prokaryotic type
rRNA helicases
RIN60_02805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
WNN72319
LinkDB
All DBs
Position
581617..583569
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AA seq
650 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSFWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQSLREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLSIPEVELPNADLLGKRRLEKFAAKVQQQLESSDLDLYRGLLAKIQPTAEGEELD
VETLAAALLKMAQGERSLIVPPDAPMRPKREFRERDDRFERRDRNDRGPRDRNDRGGEDR
PKRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELPK
GMPGEVLQHFTRTRILNKPMNMQLMGDAQPRPDRGGRGGERREGGRAFGGERREGGRGFG
GERREGGRGDGRRFSGERRDGGNRAPRRDDAGAAPRRDDSTGRRRFGGDA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctggggctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctgggcggccgcgatgttctgggtatggcccagaccggtagcggtaaaaccgcagcgttc
tctttaccgctgctgaacaaccttgatcctgagctgaaagcaccacagattctggtgctg
gccccgacccgcgaactggcggttcaggtggctgaagcaatgactgatttctctaaacac
atgcgcggcgtgaacgtggtagccctttacggcggccagcgttatgacgtgcagttacgc
gccctgcgtcaagggccacagattgttgtcggtaccccaggtcgtctgcttgaccacctg
aagcgcggcactctggatctctctaaactgagcggtctggtgctggacgaagctgacgaa
atgctgcgtatgggctttatcgaagacgttgaaaccatcatggctcagatcccagaaggt
catcagaccgctctgttctctgcaaccatgccggaagctatccgtcgtattacccgtcgc
tttatgaaagagccacaggaagtacgcattcagtctagcgtgacaacccgtccggacatc
agccagagcttctggtctgtctacggcatgcgtaaaaacgaagcgctggtacgtttcctg
gaagcggaagattttgatgcggcgattatcttcgtccgtaccaaaaacgcgactctggaa
gtggctgaagcactggaacgtagcggctataacagcgccgcgctgaacggtgacatgaac
cagtccctgcgtgagcagactctggaacgtctgaaagacggtcgtctggacatcctgatt
gcaaccgacgttgcggcacgtggcctggacgttgaacgtattagcctggtggttaactac
gacatcccgatggactccgagtcttacgttcaccgtattggtcgtaccggccgtgcgggt
cgtgctggccgtgcgctgctgttcgttgagaaccgtgagcgtcgtctgctgcgcaacatt
gaacgcaccatgaagctgtccattccagaagttgagctgccaaacgcagatctgctgggc
aaacgccgtctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgatctg
gatctgtaccgtggtctgctggctaaaatccagccaacggctgaaggcgaagagctggac
gttgaaacgctggctgcggctctgctgaaaatggcacagggcgaacgttctctgatcgtt
ccaccagatgcgccaatgcgtcctaagcgtgagttccgcgagcgtgacgatcgtttcgaa
cgtcgtgaccgtaacgaccgtggtccacgcgatcgtaacgaccgtggcggcgaagatcgt
cctaaacgtgagcgtcgtgacgttggcgatatggaactgtaccgtattgaagttggccgt
gatgacggtgttgaagttcgtcatatcgttggcgctatcgcgaacgaaggtgatatcagc
agccgttacatcggtaacatcaaactgttcggtacgcactcgactatcgaactgccaaaa
ggcatgccgggagaagtactgcagcactttactcgcactcgcatcctgaacaagccgatg
aacatgcagctgatgggcgatgctcagcctcgtcctgaccgtggtggtcgcggtggcgaa
cgtcgcgaaggcggtcgtgcattcggtggcgaacgtcgtgaaggcggccgcggtttcggt
ggtgagcgtcgtgaaggcggccgtggcgatggtcgtcgcttcagcggcgagcgccgtgac
ggtggtaaccgtgcgccgcgccgtgatgatgctggtgcagcaccacgtcgtgatgactct
accggtcgtcgtcgcttcggcggtgacgcataa
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