Kluyvera cryocrescens: RIN60_12840
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Entry
RIN60_12840 CDS
T09399
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kcy
Kluyvera cryocrescens
Brite
KEGG Orthology (KO) [BR:
kcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kcy03016
]
RIN60_12840
Enzymes [BR:
kcy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RIN60_12840
Transfer RNA biogenesis [BR:
kcy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RIN60_12840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
WNN69981
LinkDB
All DBs
Position
2680063..2681997
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFISPPQMKKVMHGDRI
IAVIHADKGKESAEPEELVEPFLTRFVGKVHRKDDRLSIVPDHPLLKDAIPCRADRNVTH
DFKEGDWAVAEMRRHPLKGDRTFYAELTKFITFGDDHFVPWWVTLARHNLEKEAPDGVAT
EMQDEGLERRDLTALDFVTIDSASTEDMDDALYVEEGTEGKLLLTVAIADPTAWIVEGSK
LDDAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANLVRPVLACRMTLAADGTIEDNIEF
FAANIESKAKLAYDDVSGWLENSGSWQPPSEAIARQITLLARVCQVRSEWRKTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHTGFA
PDNTEALAALLKTHDVHVDPVEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESVARPQDDVTVQMAERRRLNRM
AERDVADWLYARYLNPQAGTETRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
MVCSQENGTVQIKGEVAYKVTDVIDVTIAEVRMETRSVIARPVV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggataacccgctgctcgcgcagctaaaacagcaacttcattcccagacgccg
cgtgcggaaggggtcgttaaagccacggaaaaaggtttcggtttcctcgaggttgacgcg
caaaaaagctactttatttcaccgccgcagatgaaaaaagtgatgcacggcgaccgtatt
attgccgtcattcatgccgataaaggcaaagagagcgctgagccggaagaactggttgaa
ccgttcctgactcgctttgtgggtaaagtccatcgtaaagacgatcgtctgtctatcgtg
ccagaccacccgctgctgaaagatgccatcccttgccgcgccgatcgcaatgtgacacac
gatttcaaagagggtgactgggccgttgcagaaatgcgccgtcatccgctgaaaggcgac
cgcaccttctacgccgaactgaccaagtttattacctttggtgatgaccacttcgtaccg
tggtgggttacccttgctcgccataatctggaaaaagaagcgccagacggtgtggcgacg
gagatgcaggatgaaggcctggagcgccgcgatctgacggcgctggacttcgtgactatc
gacagcgccagcaccgaagatatggatgatgcgctgtacgtcgaagaaggcactgagggc
aaactgctgctgaccgtcgccattgccgatccgaccgcatggattgtcgaaggcagcaag
ctggatgatgcagcgaaaattcgcgccttcaccaactacctgccaggcttcaacatcccg
atgctgccgcgcgagctgtctgacgatctgtgttcgctgcgcgccaacctggtgcgccca
gtactggcctgccgcatgacgctggccgctgacggtactattgaagacaacattgaattc
tttgccgccaacatcgaatcaaaagccaaactggcctatgacgatgtttccggttggctg
gaaaacagcggtagctggcagccaccgagcgaggcgattgcccgccagatcaccctactc
gcccgcgtgtgccaggtgcgtagcgaatggcgtaaaacccatgcgctggtgttcaaagac
cgtccggactaccgtttcgtattgggtgagaaaggcgaagtgctggatatcgttgccgag
ccgcgtcgcatcgctaaccgtatcgtcgaagagtcgatgattgccgccaacatttgcgcc
gcgcgcgtgctgcgcgacaaactcggttttggtatctacaacgtccataccggttttgcc
cctgataacaccgaagcgctggccgccctgctgaaaacgcacgacgtgcatgtcgatccg
gttgaagtactgacgctggatggattctgcaaactgcgtcgcgaactggatgctcagcct
accggcttccttgatagccgcattcgtcgcttccagtcgtttgcggaaattagtactgaa
ccgggcccgcactttggcttaggccttgaagcctacgccacctggacatctccgattcgt
aagtacggcgacatggtgaaccatcgcctgctgaaagcgattattaaaggtgaatccgtt
gctcgtccacaggatgacgtgacggtacagatggccgagcgtcgtcgtttgaaccgtatg
gcggaacgcgacgttgccgactggctgtatgcgcgttatctcaatccgcaggccggaacc
gaaacacgctttgctgcagagatcatcgatgtgagccgcggcggtatgcgcgtgcgtctg
gtcgataacggcgccgttgcctttatccctgcgccgttcctgcacgccgtgcgtgatgaa
atggtatgcagccaggaaaatggcaccgtgcaaatcaaaggcgaagtggcgtataaggtc
actgacgtcattgatgtcaccatcgcggaggtccgtatggagacccgcagcgtgattgcc
cgtccggttgtctaa
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