Kluyvera cryocrescens: RIN60_15950
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Entry
RIN60_15950 CDS
T09399
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kcy
Kluyvera cryocrescens
Pathway
kcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RIN60_15950 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kcy03019
]
RIN60_15950 (rhlE)
Enzymes [BR:
kcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RIN60_15950 (rhlE)
Messenger RNA biogenesis [BR:
kcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RIN60_15950 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WNN70560
LinkDB
All DBs
Position
complement(3353680..3355053)
Genome browser
AA seq
457 aa
AA seq
DB search
MSFDSLGLNPDILRAVAEQGYQEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QTLVSRDPHVKGRRPVRALILTPTRELAAQIGENVREYSRYLNIRSLVVFGGVSINPQMM
KLRSGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK
RQNLLFSATFSDDIKALAEKLLTNPLEIEVARRNTASEQVTQHVHMVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNFELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEIKLLRDI
ERLLKKEIPRIALPGYEPDPSIKAEPIQNGRQQRGGGNGNGGGRGRQGQSQGGGRGQQQP
RRTDGGAPKAKPRSAEGKPAGDKPRPPRRPRKPAAAQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctcggattgaaccccgatattctgcgtgccgttgctgagcaaggc
taccaggaacccacccccattcagcagcaggcgatccctgctgtactgcagggccgcgat
ctgatggcgagcgcgcaaacgggtaccggtaaaaccgcaggttttactctgccgctgctg
cagacgctggtctcccgcgatccacacgttaaaggccgccgtccggtacgtgcgctgatc
ctgacgccaacccgcgagctggcagcacagattggtgaaaacgttcgcgaatacagccgc
tacctgaacattcgctcgctggtggttttcggcggcgttagcattaacccgcagatgatg
aagctgcgcagcggcgttgacgtactggtggcaaccccaggccgtctgctggatctggaa
catcaaaacgccgtgaagctcgatcaggttgagattctggtgcttgatgaagctgaccgt
atgctggatatgggcttcatccatgatattcgtcgcgtgctgaccaagctgccggcgaaa
cgccagaacctgctgttctccgccactttctctgacgacatcaaagcactggcagaaaaa
ctgctgaccaatccgctggaaattgaagttgcgcgtcgtaacactgcctctgagcaggtg
acccagcatgttcacatggtggacaaaaagcgtaaacgcgaactgttgtcgcagatgatt
ggcgaaggtaactggcagcaggtgttggtcttcacccgtactaaacacggggctaaccat
ctggcagagcagttgaataaagacggcattcgcagcgctgccattcatggcaacaaatcg
cagggtgcgcgtacccgcgcgctggctgattttaaatctggcgatattcgtgtgctggtg
gcgaccgacattgcggcacgtggcctggatatcgaagagctgccgcacgtcgtgaacttt
gagctgccaaacgtaccggaagattacgtacaccgcattggccgtaccggccgtgcggcg
gcaaccggcgaagcgctgtcgctggtgtgcgtcgatgaaattaaactgctgcgcgatatc
gaacgtctgctgaagaaagagatcccacgcattgcgctgccgggttatgaaccggatccg
tctatcaaggctgagccgattcagaacggtcgtcagcagcgtggcggtggtaacggaaac
ggcggcggtcgtggtcgccagggccagagtcagggcggcggacgcggtcagcagcagccg
cgtcgtaccgacggcggtgcgccaaaggctaagccgcgtagtgcggaaggcaaaccggcg
ggcgataagccacgcccaccgcgccgcccgcgtaaaccggcggcagcacagtaa
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