Kluyvera cryocrescens: RIN60_18505
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Entry
RIN60_18505 CDS
T09399
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kcy
Kluyvera cryocrescens
Pathway
kcy03030
DNA replication
kcy03430
Mismatch repair
kcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RIN60_18505 (dnaE)
03430 Mismatch repair
RIN60_18505 (dnaE)
03440 Homologous recombination
RIN60_18505 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kcy03032
]
RIN60_18505 (dnaE)
03400 DNA repair and recombination proteins [BR:
kcy03400
]
RIN60_18505 (dnaE)
Enzymes [BR:
kcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RIN60_18505 (dnaE)
DNA replication proteins [BR:
kcy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RIN60_18505 (dnaE)
DNA repair and recombination proteins [BR:
kcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RIN60_18505 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WNN71009
LinkDB
All DBs
Position
complement(3891102..3894584)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFHVQSELFGDELTQLTVLAANNVGYQNLTLLISKAYQRGYGAAGPIIDRDW
LIELKEGLILLSGARMGDVGRALLRGNTALVEQCVAFYEEHFPDAYFLELIRTGRQDEEA
YLHAAVALAETRGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPRNYSSQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVAKSHEGL
EERLEFLFPDPEVRAQKRPPYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEQGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRERNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAKKRGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNQDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCMPWPEHTVLEGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTEALEKYQHLLENDRILIVSGQVSFDDFSGGLKMMAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRSLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtgcacctgcgggtgcatagcgactactccatgattgatggg
ctggcaaaaaccggaccgctggtaaaaaaggcggccgctttaggcatgcccgcactagcg
atcaccgattttaccaacctttgcggtctggtgaagttttacggagcggggcatggggcc
gggattaaacccatcgttggcgccgattttcacgtccagagtgagcttttcggcgacgaa
ctgacccagctgacggtgctggcggccaacaacgttggctatcagaacctgacgctgctg
atttctaaagcctatcaacgcggctatggagcggcggggccgattatcgatcgcgactgg
ctgatcgaattaaaagaagggctgatcttactctccggcgcgcggatgggggatgttggc
cgtgccttgctgcgcggcaacacggcgttggttgaacagtgtgtcgcgttttatgaagag
cacttccctgacgcctatttccttgagcttatccgtaccggtagacaggatgaagaagcg
tatctgcatgctgcggtagcgctggcggaaacgcgcggcctgccggtagtggcaaccaat
gacgttcgcttcctggagccgggtgattttgacgcccatgaaattcgcgtcgcgatccac
gacggcttcaccctcgacgacccaaaacgcccgcgtaattactcttcgcagcaatatatg
cgtagcgaagaggagatgtgcgagctgttctcggacattccggaagcgctggaaaacagc
gtcgagatagccaagcgctgtaacgtgacggtgcgcctcggtgagtacttcctgccacag
ttcccgaccggcgatatgaccaccgaggatttcctcgtggcaaaatcccatgaagggctg
gaggagcgtctggagttcctgttccccgatcctgaagtccgtgcgcagaagcgcccacct
tacgatgaacgtctggaaattgaacttaaggttatcaaccagatgggcttcccgggttac
ttcttgatcgtaatggaatttatccagtggtcgaaagataacggcgtgccggtaggtcct
ggccgtgggtccggtgcgggctcgctggtggcctatgcgctgaaaattaccgaccttgac
ccgctcgaatttgacctgcttttcgaacgtttccttaacccggaacgtgtttcgatgccc
gatttcgacgttgacttctgtatggaaaaacgcgaccaggtgatcgaacacgtcgcggac
atgtacggtcgtgacgcggtttcgcagattatcaccttcggtaccatggcggcgaaagcg
gttattcgcgacgtaggccgcgtactggggcatccgtatggcttcgtggaccgtatctcc
aagctggttccgcccgatccgggcatgacgctggccaaagcctttgaagccgaaccgcag
ctgccggaaatttacgaagcagatgaagaagttcgcgcgttgatcgacatggcgcgtaag
cttgaaggggtaactcgtaacgccggtaagcacgccggtggcgtggttatcgcgccgact
aaaattaccgattttgcaccgctctactgcgatgagcaggggctgcacccggtcacccag
tttgataaaaacgacgtggaatatgccgggctggtgaagtttgacttcctcggtctgcgt
accctcaccatcatcaactgggcactggagatgatcaacgcccgccgtgaacgcaacggc
gagccgccgctggatattgccgctatcccgctggatgacaagaaaagcttcgatatgctg
cagcgctcggaaaccacggcggtattccagcttgaatcccgcggcatgaaggatctgatt
aaacgtctgcagccggactgcttcgaagatatgatcgcgctggtggccctgttccgtccg
ggcccgctgcaatcggggatggtagataactttatcgaccgtaaacacggtcgcgaagag
atttcctacccggacgttcagtggcagcatgagtgcctgaagccggtgctggaaccaacg
tacggcattatcctgtaccaggaacaggttatgcagattgcccaggagctttccggctat
actctgggcggcgcagacatgctgcgtcgtgcgatgggtaagaaaaagcctgaagagatg
gccaagcagcgcggcacctttgaagaaggggcgaaaaaacgcggtgttgatggcgagctg
gcgatgaaaatctttgacctggtggaaaaattcgccggttacgggtttaacaaatcacac
tctgccgcctatgctttggtctcatatcagacgctatggctgaaagcgcactatcccgct
gagtttatggcggcggtaatgactgccgatatggacaacaccgagaaggtggttggcctg
gtggatgagtgctggcgaatggggctgaagatactgccgcctgatatcaattccggttta
tatcatttccacgttaatcaggacggggaaatcgtgtatggtatcggcgcgattaaaggc
gttggcgaaggcccgattgaagcaatcatcgaagcgcgcaataacgggggctatttccgc
gagctgtttgacctctgtgcgcgcaccgataccaagaagctcaaccgccgggtgctggaa
aaactgattatgtccggggcctttgaccgccttgggccacaccgcgccgcgctgatgaat
tcgttgggcgatgcgttaaaagccgctgatcagcacgcgaaggcggaagccattggtcag
gcggatatgttcggcgtattggccgaagagccagagcaaattgagcagtcgtacgctaac
tgcatgccctggcctgaacacacggtgctggaaggtgaacgggaaacgttaggtttatac
ttaacgggccacccgattaaccagtacctcaaagaaattgagcgctatgtcggcggctat
aggctaaaagacatgcatccgacagaacgtggtaaagtgaccacggctgcggggctcgtg
attgctgcaagggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgctggat
gaccgttccgggcggctagaggtgatgctcttcaccgaggccctggaaaaataccagcat
ctgctggaaaacgaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggcggccttaaaatgatggcccgcgaagtgatggacattgacgaagcccgggaaaaatac
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgttcgggaaccattccagtacatctctactatcag
agggcggatgcacgtgcgcggttgcgtttcggtgcaacctggcgtgtctctccgagcgat
cgtttactcaacgatctgcgtagcctcatcggttcggagcaggtggaactggagtttgac
taa
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