Kluyvera cryocrescens: RIN60_18700
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Entry
RIN60_18700 CDS
T09399
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
kcy
Kluyvera cryocrescens
Brite
KEGG Orthology (KO) [BR:
kcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kcy03019
]
RIN60_18700 (hrpB)
Enzymes [BR:
kcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RIN60_18700 (hrpB)
Messenger RNA biogenesis [BR:
kcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RIN60_18700 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
CON_HrpB
Helicase_C
HA2_N
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WNN71046
LinkDB
All DBs
Position
complement(3939782..3942211)
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AA seq
809 aa
AA seq
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MSLLPVASILPELLLALRQSPQVLLNAPTGAGKSTWLPLQILRDGGIEGRILLLEPRRLA
ARNVAQRLAELLGEKPGETVGYRMRAETCVGATTRLEVVTEGILTRMIQHDPELSGVGLV
ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDSDKLQRLLPQAPILISEGRA
FPVERRYQSLPSHQRFDEAVAIATAELLRNEPGSLLLFLPGVGEIQRVQNLLAERVADDV
LLCPLYGALPLSEQRQAILPAPAGKRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDV
RTGLTRLLTQRVSQASMTQRAGRAGRLESGVCVHLLAKEQAERAAAQSDAEILQSDLSSL
LLELLQWGCTDPAQLSWLDQPPAANLAAARRLLTQLAALADERLTAKGQKMAALGNDPRL
AAMLVAAQSEDEVATAARLAAILEEPPRGASHDLLQAFSRPQGQWQQRSQQLCKRLNRRA
GQPDSDAIPTLLAQGFPDRIARRRGQEGRYQLANGMGAMLDADDALNRHEWLIAPLLLQG
NAAPDARILQACALDIDALVARCPSLLQQSDTIEWDDAQGTLKALRRSQIGQLTLSVRPL
AKLSESELHQAMLTGIREKGLSVLNWTSEAQQLRLRLQCAARWLPEEPWPAVDDATLLDE
LESWLLPHMTGVHSLRGLKSVDIYQALRDRLPWSLQQRLESSLPTHYTVPTGSRIAIRYD
EDNPPALAVRMQEMFGEASTPTIAQGRVALVLELLSPAQRPLQITRDLSAFWQGAYREVQ
KEMKGRYPKHVWPDDPANTAPTRRTKKYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctgttgccggtcgcaagcatccttcctgaacttcttctcgccttacggcaatcc
ccgcaggtgctgctgaatgcgccgacgggggcgggtaaatcgacctggctgccgctgcaa
attttacgcgacggcggcattgaggggcgcatcctgctgctggagcctcgtcggctggcg
gcgcgtaacgttgcgcaacggctggctgagctgttgggagagaaacccggggaaacggtg
ggttatcgcatgcgcgccgaaacctgcgtcggtgcgacaacgcggctggaagtggtaacg
gaggggatcctgactcgcatgatccaacacgatccggaactctccggcgtggggttggtg
atcctcgatgagtttcatgaacggagtctgcaggcggatctggcgctggcgttactgctg
gacgtgcagcaggggctgcgcgatgacctgaagctgctgatcatgtcggcgacgctggat
agcgacaaactccaacgcctgctgccgcaggctccgatcctcatttccgagggccgggcc
ttcccggtggaacgccgctatcagtcattgccatcgcatcagcgctttgatgaagcggtg
gcgattgccacggctgagttgttgcgcaatgagccaggttcactgttgttatttttaccc
ggcgttggcgaaatccagcgggtgcagaatttgcttgctgagcgcgtggctgacgacgtg
ctgctttgtcctttatatggtgcgctgccgctgagcgaacagcggcaggcgattcttccc
gccccagcgggcaaacgcaaagtggtgctggcgaccaatattgcggaaaccagcctgacg
attgaagggattcggctggtggtcgatagcgcgcaggagcgcgtggcgcgctttgatgtc
cgcactgggctgacgcgtttattaacccagcgcgtcagtcaggcgtcgatgacccagcgc
gccgggcgtgccgggcgactggaatcgggcgtttgcgtgcatctgctggcaaaagaacag
gccgaacgcgcggcagcgcaaagcgatgcggagatcttacaaagcgatctgtcgtcgctg
ctgctggagctgctgcagtggggatgtaccgatccggcgcagcttagctggctggatcag
ccgcccgcggcgaatcttgctgccgcgcgccgtttgctcacgcagcttgctgcgctggcc
gatgagcgtttaacggcgaaggggcaaaaaatggcggcgctgggtaacgatccgcgtctt
gcagccatgctggttgccgcgcaaagcgaggatgaagtggcgacggcggcgcgtttggcg
gcgattctggaagagccgccgcgtggcgcaagccatgatctgttgcaggcattttctcgc
ccacagggccagtggcagcagcgcagccagcagctttgcaagcgcctcaatcgccgtgcg
ggacagccggacagcgatgccattccgacgctgctggcgcagggctttcccgatcgtatt
gcccgccgacgcggacaagaggggcgctatcaactggcgaacggaatgggggcgatgctc
gatgcggacgatgcgttaaatcgccacgaatggctgatagctccgctgttgcttcagggc
aacgctgcaccggacgctcgcattttgcaggcctgcgcgctggatatcgacgcgctcgtc
gcccgttgcccctcattgcttcaacaatctgacacgattgagtgggacgatgctcagggg
acgcttaaagcactgcggcgcagccagattggccaactgacgctcagcgtgcgtccgttg
gcaaaactgtccgaaagtgaactgcatcaggcgatgctgaccggtattcgcgagaaagga
ttaagcgtgcttaactggacgagcgaagcgcagcagctacgcttgcgtttacagtgtgcc
gcgcgctggcttccagaagagccgtggccagcggttgatgacgcgacgttgctggatgaa
ctggaaagctggctgctgccgcatatgaccggcgttcactcgctgcgtgggctgaaatcc
gtggatatttatcaggcgctgcgggaccggctgccgtggtcattacaacaacgtctggag
agttccctgccaactcattacactgtgccgacgggaagccgaattgcgattcgctatgac
gaagacaatccgcctgcgctggcggtgcgaatgcaggaaatgtttggtgaagccagcacg
ccgactatcgcccaagggcgggtggcgctggtgctggagctactttcacccgctcagcgt
ccgttgcagattacgcgtgatttaagcgcgttttggcaaggggcgtaccgcgaggtgcaa
aaagagatgaaggggcgctatccgaagcacgtctggccggacgatccggcgaataccgcg
ccaacgcggcggacgaagaaatattcatga
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