Kluyvera cryocrescens: RIN60_21705
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Entry
RIN60_21705 CDS
T09399
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kcy
Kluyvera cryocrescens
Pathway
kcy03420
Nucleotide excision repair
kcy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RIN60_21705 (uvrD)
03430 Mismatch repair
RIN60_21705 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kcy03400
]
RIN60_21705 (uvrD)
Enzymes [BR:
kcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RIN60_21705 (uvrD)
DNA repair and recombination proteins [BR:
kcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RIN60_21705 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RIN60_21705 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WNN71597
LinkDB
All DBs
Position
complement(4616381..4618543)
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAKRTNMLVLAGAGSGKTRVLVHRIAWLQSVENCSPYSIMAV
TFTNKAAAEMRHRIAQLMGTSQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWFINSQKDEGLRPHHLQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQVSMPYRIYGGMRFFERQEIKDALSYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVVKDSGLRMMYEQEKGEKGQTRIENLDELVTATRQFSYNEEEEDLLPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEQCVEEVRLRATVSRPVNHQRMG
TPMAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagcctcaacgataaacagcgcgaagccgtcgcggca
aagcgtaccaatatgctggtgctcgccggggcaggcagtggtaagacgcgcgtgctggta
caccgtatcgcctggctgcaaagtgtggaaaactgctcgccgtactcaattatggcggtg
accttcaccaacaaagcggcggcagaaatgcgccaccgtatcgcgcagctgatgggcacg
tctcagggcggcatgtgggttggtacgttccacgggctggcgcaccggctgctgcgcgcg
caccatttggatgccaatctgccgcaggattttcagatcctcgatagcgaagaccaactg
cgtttactgaagcgtctgatcaaggcgatgaaccttgatgagaagcagtggccgccgcgt
caagccatgtggtttatcaacagccagaaagacgaagggctgcgtccgcatcatttgcag
agctatggcaacccggttgagcagacctggcagaaggtctatcaggcctaccaggaggcc
tgcgaccgcgccgggctggtggatttcgccgagctgctgctgcgcgcccacgagctgtgg
ctcaacaaaccgcatattcttcagcactatcgtgaacgcttcaccaatattctggtggac
gaattccaggataccaacaacatccaatacgcgtggatccgtctgttggcgggggatacc
ggcaaggtgatgatcgtcggggatgatgaccagtcgatctacggctggcgcggagcgcag
gtggaaaacatccagcgcttcctgaacgatttccctggtgccgaaaccatccgccttgag
cagaactaccgttcgaccagcaatatcctgagtgcagccaacgccttgattgaaaacaac
aacgggcgtctgggcaaaaaactgtggaccgatggcgtcgacggcgaaccaatctcgctc
tattgcgcttttaacgaactcgacgaagctcgcttcgtggttaaccgtatcaaaacctgg
caggacaacggcggcgcgcttgagcagtgcgcgattctctatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgttgcaggtcagtatgccgtaccgtatctacggcggtatg
cgcttcttcgagcgtcaggaaattaaagatgcgctctcttacctgcgtcttatctccaac
cgcaacgacgacgcggcctttgagcgcgtggtgaatacaccaacgcgtgggattggcgat
cgcacgctggacgtcgtccgccagacatcgcgcgaccgtcagctcacgctgtggcaggcc
tgccgggagctgctgcaagagaaagcgctcgccgggcgcgccgccagcgcattacagcgt
tttatggagctgattgacgctctggcgcaggaaacggccgatatgccgctgcacgtgcag
actgaccgggtggtgaaagattccggcctgcgcatgatgtacgagcaggaaaaaggtgag
aaaggccagacgcgtattgagaacttagacgaactggtaacggcaacgcgccagttcagc
tacaacgaagaagaagaggatttactgccgctgcaggcattcctctcccacgcggcgctg
gaagcgggcgaaggacaggccgatacctggcaggatgcggtacagctgatgacccttcac
tcggccaaaggtctggagttcccgcaggtgtttatcgtcgggatggaagaggggatgttc
ccaagccagatgtcgctggatgaaggtggacgtttggaagaagagcgtcgtctggcctac
gttggcgtgacccgcgccatgcagaagctgacgctaacctatgcggaaacgcgtcgtctg
tacggcaaagaggtttaccatcgcccatcgcgctttatcggcgaactgcccgagcagtgc
gtagaagaagtgcgtctgcgtgcgacggtaagtcgcccggttaaccatcagcggatgggg
acgccgatggcggagaacgacaccggctataagcttggccaacgcgttcgccacgccaag
tttggcgaaggtaccattgtcaatctggaaggcagcggcgagcatagccgcctgcaggtc
gcgttccaggggcaggggattaaatggctggtggcagcctatgccagattggaaactgta
taa
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