Kaistella daneshvariae: EIB71_00755
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Entry
EIB71_00755 CDS
T06920
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kda
Kaistella daneshvariae
Pathway
kda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIB71_00755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kda03019
]
EIB71_00755
03009 Ribosome biogenesis [BR:
kda03009
]
EIB71_00755
Enzymes [BR:
kda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EIB71_00755
Messenger RNA biogenesis [BR:
kda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EIB71_00755
Ribosome biogenesis [BR:
kda03009
]
Prokaryotic type
rRNA helicases
EIB71_00755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AZI66294
LinkDB
All DBs
Position
complement(158650..160416)
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AA seq
588 aa
AA seq
DB search
MNLFTETNLSPEILKAIGELGFVSPTEIQKQTIPFISTDIRDLIALAQTGTGKTAAFTLP
ILDMIDDGSRKIQLLVLCPTRELCLQITKDITNYSKYMRNIKTTAVYGGSSITDQIRSLR
DKPQIVVGTPGRVIDLINRKALDFSEIRWMILDEADEMLSMGFKDDLETILRETPDTKQT
FLFSATMNKEVERISKNYLTDPFRITVGSANEVKKNIKHEFYVVGYRNKKEALKRLIDAN
PNQYSIIFCRTRMETQEVADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILVATD
VAARGLDVNSLTHVIHFSLPDDPEVFVHRSGRTGRAGKDGISMALIKPEESRKLKQIKQS
TKIDIVEKKIPTGKKIIEAQVAGVFEKLFTEHENLVEFDDELIPDLSAFTKEELVHQLLQ
LQLRDMALYYKDKDDLLEVKFNSDDRGSDRGRDRGRDRDGRGRDRDRGDRRDGGNRFSSN
REGGSREFSRDRDGGNREFKERKPRKNNGDMVRFFFNLGKRDHLKKIDMLEIINKSTAKS
KKRPDIGDIEILEKFSFFEVEKSYKDEVLKGLQTQKFKGKELRAEESK
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttacggagaccaatttaagtcctgaaattttgaaggcaattggcgaactg
ggctttgtgagcccaacagaaatccaaaaacagactattccttttatctctacagatata
cgcgatcttatcgcacttgcgcagacgggaacaggcaaaacagcagcttttacgcttccg
attttggatatgattgacgacgggagtcgcaaaatccaattattggtgctttgtccaacc
agagaactttgtttgcaaattaccaaagacattactaattattcgaaatacatgcgaaac
atcaaaactacagcggtttatggtggaagcagtatcaccgatcagatccgatcgttgcgg
gacaaaccacaaatcgtggtgggaactccgggacgtgtcatcgatttgattaacagaaaa
gcacttgatttctctgaaatcagatggatgattcttgatgaagctgatgaaatgttatca
atggggttcaaagacgatttggaaaccatcttacgcgaaacgcctgatacaaaacaaact
tttcttttctcggcaacgatgaataaggaagttgaaagaatttctaaaaattatttgacc
gatcctttccgcattacggtgggttccgcaaacgaggtaaagaaaaacatcaagcacgaa
ttttacgtggttggttacagaaacaaaaaagaagcgttgaaaagattgattgatgcaaat
cctaatcagtattcaattattttttgccgaacccgtatggaaactcaggaagtcgctgac
tttttgatgcagaacggttacgccgcagatgcgcttcacggtgatttgtcacaggcccag
cgcgacacggtgatgaaaaaattccgtttgaaaaacatcgatattttggtggcaaccgac
gttgctgcgcgaggattggatgtgaattccttaacgcacgttatccatttttctttgccc
gatgacccggaagtgtttgttcaccgaagcggtagaacaggccgtgccggaaaagacgga
atttccatggcgctgattaaacctgaagaatcccgtaaattaaagcaaattaagcagtct
acgaaaattgatatcgtagagaaaaaaattccgacaggaaagaaaatcatcgaagcacag
gttgccggcgttttcgaaaaactgtttacggaacacgaaaatttggtggaatttgatgac
gaattaatcccggatttatctgcttttacaaaagaagaattggtgcaccagcttttgcag
cttcagttgcgtgatatggcgctttattataaagataaagacgatttgcttgaagttaag
ttcaatagtgatgaccgtggaagcgacagaggaagagatcgtggcagggaccgcgacgga
agaggcagagaccgcgaccgtggtgacagaagagacggtgggaaccgattttcttctaac
agagaaggcggaagccgtgaatttagcagagaccgcgatggtggaaaccgcgaattcaag
gaaagaaaaccaagaaaaaataacggcgatatggtgcgttttttctttaatctcggaaaa
agagatcatttgaaaaaaatcgatatgttggaaatcatcaacaaatcaaccgcgaaatcc
aagaaaagaccggacattggcgatatcgaaattttagaaaaattctccttttttgaggta
gaaaaatcttacaaagacgaagtattgaaaggtttgcaaacgcagaagtttaaaggaaaa
gaacttcgcgcagaagaatcgaaataa
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