KEGG   Kaistella daneshvariae: EIB71_01850
Entry
EIB71_01850       CDS       T06920                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
kda  Kaistella daneshvariae
Pathway
kda02020  Two-component system
kda02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:kda00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EIB71_01850 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    EIB71_01850 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kda03021]
    EIB71_01850 (rpoN)
Transcription machinery [BR:kda03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EIB71_01850 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AZI66497
UniProt: A0A3N0WVV9
LinkDB
Position
complement(400979..402454)
AA seq 491 aa
MLKQNLQMRLGQKLAPQQIQLMKLIQLHTLEFEEELERELEENPALEKVQEENKEEEFSS
EETFEEEGTESIDTDFDVNDYIFDDEPAYKTTTSNYSADDEEFDNQSLLTEGQSLYDYLL
EQIRLSNIENEDLLIAEYIIGNLDNDGYLRRELKQLVDDMAFSQGVFTTVENVQEILENY
VQKLDPPGVGARNLQECLLLQIEKKVSADKAVSLAGNILRNQFDALTNKHYNKIIQKYDI
EEEDLKDALEVISKLSPRVGGNYDTQTITINNEIIPDFLITVKDNGAKGVEVIPSLNSKN
APSLRVSDEYKDILTTYSHDKKSPEHKQAALFIKQKLDAAKWYIDAINQRQNTLLQTISA
IVKLQKDYFITADDKSLKPMILKDVADITGFDISTISRVVKSKYADTPNGIVYLKSLFSD
SLTNDDGEEVSTKEIKTHLMDVINSENKRKPLTDDALVGLLKEKGYNIARRTIAKYREQL
NIPVARLRKEL
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgttaaagcaaaatcttcaaatgcgacttggccagaaactggcccctcaacaaattcag
ttaatgaagctgatacagctgcatacccttgagttcgaagaggaactggagcgcgaactg
gaagaaaatcccgcgctggaaaaagtgcaggaagaaaataaggaggaagaattttcttcc
gaagaaactttcgaagaagaaggcaccgaaagcatcgatactgatttcgatgtcaacgat
tatattttcgatgacgagccggcgtacaaaactacgacgagcaattattcggctgatgat
gaagagtttgataatcagtcgcttttaactgaagggcagtctctgtatgattatcttttg
gaacagattcgcttatcaaatatcgaaaatgaagatctgctgatcgccgaatatatcatc
ggaaacctggataacgacggatatttgcggcgcgaactgaagcagttggtggatgatatg
gcattttctcaaggtgtgttcaccacggtagaaaatgtgcaggaaattcttgaaaattat
gttcaaaagctcgatccgccgggtgttggcgcaagaaatttgcaggaatgtcttctgctt
caaatcgagaaaaaagtttctgctgacaaagccgtgagtttagccggaaatattttgaga
aatcagtttgatgcgcttacaaacaagcattataacaagattattcagaaatacgatatt
gaagaggaggatttaaaggatgctttggaagtgatttccaagctttctccgagagttggc
ggaaattatgacacgcagaccatcaccattaataatgaaattattcctgattttttaatt
acggtaaaagataacggtgcaaaaggtgtggaagtaattccgtcattaaacagtaagaat
gcaccttctttgcgtgtttccgatgaatacaaagatattttgacgacctattcacacgat
aaaaaatctccggagcataagcaggcagcgcttttcatcaaacaaaaactggatgcggca
aaatggtatattgatgccattaatcagcgccagaacacgcttttgcaaaccatttcggcc
atcgttaaacttcagaaagattatttcatcaccgctgatgacaaatctttgaaaccgatg
attctgaaagacgttgcagacattaccggttttgatatttccacgatttcccgtgtagta
aaaagcaaatatgccgatacaccaaacggaattgtttatctgaaaagtctcttttccgat
tccctgacgaacgacgatggcgaagaagtttctaccaaggaaatcaaaacccatctgatg
gacgttatcaacagcgaaaataagcgcaagccacttacggacgacgctttggtgggactt
ttaaaagaaaaaggctacaacattgccagacggaccattgcgaaataccgcgaacaactg
aatattccggtagcgcgattgcgaaaagaattgtaa

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