Kaistella daneshvariae: EIB71_01850
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Entry
EIB71_01850 CDS
T06920
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
kda
Kaistella daneshvariae
Pathway
kda02020
Two-component system
kda02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kda00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EIB71_01850 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EIB71_01850 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kda03021
]
EIB71_01850 (rpoN)
Transcription machinery [BR:
kda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EIB71_01850 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AZI66497
UniProt:
A0A3N0WVV9
LinkDB
All DBs
Position
complement(400979..402454)
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AA seq
491 aa
AA seq
DB search
MLKQNLQMRLGQKLAPQQIQLMKLIQLHTLEFEEELERELEENPALEKVQEENKEEEFSS
EETFEEEGTESIDTDFDVNDYIFDDEPAYKTTTSNYSADDEEFDNQSLLTEGQSLYDYLL
EQIRLSNIENEDLLIAEYIIGNLDNDGYLRRELKQLVDDMAFSQGVFTTVENVQEILENY
VQKLDPPGVGARNLQECLLLQIEKKVSADKAVSLAGNILRNQFDALTNKHYNKIIQKYDI
EEEDLKDALEVISKLSPRVGGNYDTQTITINNEIIPDFLITVKDNGAKGVEVIPSLNSKN
APSLRVSDEYKDILTTYSHDKKSPEHKQAALFIKQKLDAAKWYIDAINQRQNTLLQTISA
IVKLQKDYFITADDKSLKPMILKDVADITGFDISTISRVVKSKYADTPNGIVYLKSLFSD
SLTNDDGEEVSTKEIKTHLMDVINSENKRKPLTDDALVGLLKEKGYNIARRTIAKYREQL
NIPVARLRKEL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcaaaatcttcaaatgcgacttggccagaaactggcccctcaacaaattcag
ttaatgaagctgatacagctgcatacccttgagttcgaagaggaactggagcgcgaactg
gaagaaaatcccgcgctggaaaaagtgcaggaagaaaataaggaggaagaattttcttcc
gaagaaactttcgaagaagaaggcaccgaaagcatcgatactgatttcgatgtcaacgat
tatattttcgatgacgagccggcgtacaaaactacgacgagcaattattcggctgatgat
gaagagtttgataatcagtcgcttttaactgaagggcagtctctgtatgattatcttttg
gaacagattcgcttatcaaatatcgaaaatgaagatctgctgatcgccgaatatatcatc
ggaaacctggataacgacggatatttgcggcgcgaactgaagcagttggtggatgatatg
gcattttctcaaggtgtgttcaccacggtagaaaatgtgcaggaaattcttgaaaattat
gttcaaaagctcgatccgccgggtgttggcgcaagaaatttgcaggaatgtcttctgctt
caaatcgagaaaaaagtttctgctgacaaagccgtgagtttagccggaaatattttgaga
aatcagtttgatgcgcttacaaacaagcattataacaagattattcagaaatacgatatt
gaagaggaggatttaaaggatgctttggaagtgatttccaagctttctccgagagttggc
ggaaattatgacacgcagaccatcaccattaataatgaaattattcctgattttttaatt
acggtaaaagataacggtgcaaaaggtgtggaagtaattccgtcattaaacagtaagaat
gcaccttctttgcgtgtttccgatgaatacaaagatattttgacgacctattcacacgat
aaaaaatctccggagcataagcaggcagcgcttttcatcaaacaaaaactggatgcggca
aaatggtatattgatgccattaatcagcgccagaacacgcttttgcaaaccatttcggcc
atcgttaaacttcagaaagattatttcatcaccgctgatgacaaatctttgaaaccgatg
attctgaaagacgttgcagacattaccggttttgatatttccacgatttcccgtgtagta
aaaagcaaatatgccgatacaccaaacggaattgtttatctgaaaagtctcttttccgat
tccctgacgaacgacgatggcgaagaagtttctaccaaggaaatcaaaacccatctgatg
gacgttatcaacagcgaaaataagcgcaagccacttacggacgacgctttggtgggactt
ttaaaagaaaaaggctacaacattgccagacggaccattgcgaaataccgcgaacaactg
aatattccggtagcgcgattgcgaaaagaattgtaa
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