Kaistella daneshvariae: EIB71_02255
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Entry
EIB71_02255 CDS
T06920
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
kda
Kaistella daneshvariae
Brite
KEGG Orthology (KO) [BR:
kda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kda03009
]
EIB71_02255 (rimO)
Enzymes [BR:
kda01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EIB71_02255 (rimO)
Ribosome biogenesis [BR:
kda03009
]
Prokaryotic type
ribosomal protein modification factors
EIB71_02255 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TRAM
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
AZI66574
LinkDB
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Position
complement(495246..496547)
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AA seq
433 aa
AA seq
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MRTKSVGKKKINIVTLGCSKNVYDSEVLMGQLQANGKEVVHEDKGDIVVINTCGFIDNAK
EESINTILEFVEAKNRGEVEKVFVTGCLSERYKPDLVREIPDVDQYFGTRDLPLLLKQLG
ADYKHELVGERLTTTPKHYAYLKIAEGCDRPCSFCAIPLMRGKNISTPIENLVIEAEKLA
KKGVKELILIAQDLTYYGLDIYKKRALGDLLLRLVKVEGIEWIRLHYAFPSGFPEDVLEI
IKNEPKVCNYIDIPLQHINSEILKDMKRGTTHEKTNSLLAKFREKVPDMAIRTTLIVGFP
GETREKFEEMKEWVREQRFDRLGCFTYSHEENTTAFVLEDNVPQEEKEARVEEIMELQSQ
ISWEKNQEKIGKVFRCIFDRKEGNYFVGRTEFDSPDVDNTVLVSAENTYLSLGEFADVTI
TAAEEFDLYGELV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgaaatcagtaggaaaaaagaaaataaatattgtaaccttaggatgttccaag
aacgtctacgattcagaagtcctcatgggccagcttcaagcaaacggaaaagaagtcgta
cacgaagataaaggcgatattgtcgtcatcaatacttgtggatttatcgacaacgcaaaa
gaagaaagcatcaacaccatattagaatttgtagaagctaaaaaccgcggcgaagttgaa
aaagttttcgtcactggatgtctttcagagcgctacaagccggatttggtacgtgaaatc
cccgatgttgatcaatattttggtactcgggatctgccgcttttattaaagcagttgggc
gctgattacaaacacgaattggtgggagagcgtttgactaccacaccgaaacattatgcc
tatttaaaaattgcggaaggttgcgaccggccgtgcagtttctgtgcaattcctttaatg
cgtggtaaaaatatttcaacaccaattgaaaatctggtgattgaagctgaaaaattagcc
aaaaaaggcgttaaagaattgattttaatcgcgcaggatttgacgtattatggtcttgat
atttacaaaaaacgcgcgcttggcgatttattacttcgacttgtaaaagttgaggggatt
gaatggattcgtctgcattatgcctttccttcaggtttccccgaagacgtgctggaaatc
attaaaaatgaaccaaaggtttgcaactacattgatattcctttacagcacatcaattcc
gaaattttaaaggatatgaagcgcggtacaactcatgaaaaaaccaattctttgctcgca
aaattccgcgaaaaagttcccgatatggcgattcgcaccacgctgatcgtaggtttcccg
ggcgaaacccgagaaaaattcgaggaaatgaaagaatgggtacgtgagcagagattcgac
cgattaggttgtttcacctattcacatgaagaaaataccactgcgtttgttttggaagac
aatgtgcctcaggaagaaaaagaggcgcgtgtggaagaaattatggaactgcagtcacag
atttcctgggaaaaaaatcaggaaaaaatcggtaaagttttccgctgtattttcgaccgt
aaagaaggaaattacttcgttggccgtaccgagtttgattcaccggatgttgataatacc
gttttggtgtccgcagaaaatacctatttatctttaggggaatttgcggatgtcacaatt
acagcagccgaggaattcgatttgtacggcgagctcgtttaa
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