Kaistella daneshvariae: EIB71_02400
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Entry
EIB71_02400 CDS
T06920
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kda
Kaistella daneshvariae
Pathway
kda03030
DNA replication
kda03430
Mismatch repair
kda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EIB71_02400
03430 Mismatch repair
EIB71_02400
03440 Homologous recombination
EIB71_02400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kda03032
]
EIB71_02400
03400 DNA repair and recombination proteins [BR:
kda03400
]
EIB71_02400
Enzymes [BR:
kda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EIB71_02400
DNA replication proteins [BR:
kda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EIB71_02400
DNA repair and recombination proteins [BR:
kda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EIB71_02400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HHH_3
CENP-F_N
Motif
Other DBs
NCBI-ProteinID:
AZI66601
LinkDB
All DBs
Position
533619..536678
Genome browser
AA seq
1019 aa
AA seq
DB search
MFLNCHSFHSLRYGTLSIEDLVEKAAELGITTLTLTDINTVTGIYEFYKLCRSHLIKPIV
GVDIRADNRQLYVALAKNPAGIAEINKMITDSNCDGIPVPEQNPHLENTFIVYPLENTPE
TLSETEFIGVRPEEVSFLVQKRWKNLLHKMVVFQPITFSGKREYNLHRILRAIDRNTLVS
KLDEKDICQKSEFLKPPSEVLKPFRNYPQIIENTQKIIDECDFHFKFQTPRNKKHFTASK
ESDQQLLRKLAYEGFEKRYPDHHEAARKRMEKELKVIGELNFCGYFLITWDIVQYSITRG
FMHVGRGSGANSIVSYCLGITDICPLELDLYFERFLNLNRNTPPDFDIDWSWKERDEILQ
YIFEKYGRDHVAFCGTNVEFKYRSIFREVGKAFGLPKEELDVLAKNPVETHDDNKIVKLV
QKYGRLLEKFPNQRSMHSCGILISEEPLTTYTALEMPPKGFPIVQFDMHTAEEIGLEKFD
ILSQRGLGTIEGAVQLIRKNRGVEVNIRDTAISKDEKTANEYLAQGKTLGCFYIESPAMR
GLLRRLKCNNYKTLVAASSIIRPGVAQSGMMREYIFRHNNPGKFEYFHQVFEQHLGETYG
IMVYQEDVIKIALHYGGVSADDGDILRRAMSGKSRSLKKLQEVKNHFFECAKKQGHPEKL
SAEVYRQIESFAGYSFCKAHSASYAVESYQSLYLKVHYPIEFMVAAINNGGGFYRTEVYV
HECRMAGGKIQNPCINRSVVETTVYGEEVFLGLMHIEKLESRMAQHICSERSTYGDFTSL
ENFIRRIPVGAETLQTLIFVGAFRFTGKPKNELLIEARLHLNGCKPQYRLQSFFEEDLNT
NYQLPQLKRDPFEDAFDEIEILGFAVSCSPFDLLQTKYRGSVMAKDLLKFHKKQVKMMAY
LISRKHVPTKKGTMFFGTWIDAEGEFFDTAHFPDNLQKYPFKGGGCYLLLGMVEVDFHFP
TITVLMMAKMPFIPDPRYALDKEKSYEVHRKISEDVSMTWRAPYPQEHEIGLPRFKMKE
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcaactgtcactcttttcacagtctgcgctatggcaccctttctattgaagat
ctggtggaaaaggctgcagaactcggtattaccacgctgacacttacagatattaatacg
gtgaccggcatttacgaattctacaaactctgccggtcacatcttataaaacccatcgtc
ggggtagatatccgcgctgataaccggcaactgtatgttgcccttgcaaaaaatccggct
ggaattgccgagattaacaaaatgatcacggattctaactgtgacggcattccggtgccg
gagcagaatccccacctggaaaatacttttatcgtttacccattagaaaacactccggaa
accttaagcgaaacggaatttatcggcgttcggccggaagaagtgagttttttggttcaa
aaaaggtggaaaaacctgctgcacaaaatggtagtttttcagcccatcacattttccggg
aagcgcgaatataatttacacagaatcttaagggcgatcgaccgcaataccttggtttcc
aaacttgatgaaaaagacatctgtcaaaaatccgaatttctaaagcctccttccgaggtt
ttgaaaccgttcagaaattacccgcagattattgaaaacacgcagaaaataatagatgaa
tgcgatttccattttaaatttcaaacgccgagaaataaaaaacatttcaccgcaagtaag
gaatccgaccagcaactgctgcgaaaactggcttatgaaggttttgaaaaacgttatccg
gatcatcatgaagcagcacgaaaacgcatggaaaaagagctgaaagttatcggggaactg
aatttctgcggctactttctcattacctgggacattgttcaatacagcattacccgaggt
tttatgcacgttggcagaggttcgggggcaaattccattgtgagctactgcctggggatc
accgacatttgccctctggaactcgatctgtattttgaaaggtttctcaatctgaaccgc
aatacgccgcccgatttcgatatcgactggagctggaaagagcgcgacgaaatcttacag
tatatttttgaaaaatacggcagagatcatgtggctttttgcggaaccaatgtggagttt
aaataccgctccatcttccgtgaggtcgggaaagccttcggcctgcccaaagaagaactc
gatgtcttggcgaagaatcccgttgaaacacatgatgacaataaaatagtgaaactcgtg
cagaaatacggccggcttctggaaaagttccccaaccaaagaagcatgcattcctgcgga
attttgatttccgaagaaccgcttaccacctacaccgcgctggaaatgccgccaaagggt
ttccccatcgtgcagttcgacatgcatacggctgaagaaatagggctggaaaaatttgat
attctttcccagcggggccttgggacgattgagggcgccgtgcagctcatcagaaaaaac
cggggagttgaagtgaacatccgtgatactgctatctccaaagatgaaaaaaccgccaat
gaatatcttgcgcaaggtaaaacgctgggttgtttttatatagaatctccggcgatgcgc
ggactgttgcgccgcctgaaatgcaacaattacaaaaccctggtcgcagcctcctcaatc
attcgccctggcgttgcgcaaagcggaatgatgcgcgaatatattttccggcacaataat
ccgggaaaatttgaatatttccatcaggttttcgagcagcatttaggcgaaacctacggt
attatggtgtatcaggaggatgtgattaaaatcgcactccactacggtggggtttccgca
gacgacggcgacattctgcgccgtgcgatgagcggaaaaagccgctcacttaaaaagctg
caggaagtaaaaaaccatttttttgaatgcgcgaaaaaacagggacatcctgagaaactt
tcggcagaagtctacaggcagatcgagagctttgcaggatattccttctgtaaagcccac
tccgcgagttacgcggtggaaagctaccagagtttatatttaaaggtgcactacccgatt
gaatttatggtggcggccattaacaacggcggtggcttctaccgcacagaggtttatgta
cacgaatgccgcatggcgggtggaaaaatccaaaacccctgtataaaccggagtgtagtt
gaaaccacagtgtacggtgaagaggtctttttggggttgatgcatatcgaaaagctggaa
agccgcatggcgcagcacatttgctccgaacgcagtacatatggggatttcacctcgctt
gaaaattttatcaggcgtattccggtgggagccgaaacactgcagacactgatcttcgtg
ggcgctttccgctttaccggtaaacccaagaatgagctgctcatcgaagcccgcctgcac
cttaacggttgtaaaccgcaataccggctgcagtctttttttgaagaagacctgaacaca
aactatcagctgccacagcttaagcgcgacccttttgaggatgcttttgatgaaattgag
atcctgggatttgccgtctcctgcagccccttcgaccttcttcagaccaaataccgcggc
tcggtcatggcgaaagacctgctaaaattccacaaaaagcaggtaaaaatgatggcctat
ctgatctccagaaagcatgtccctacaaagaaaggaaccatgtttttcggaacatggatt
gatgctgaaggtgaatttttcgataccgcccacttccccgacaacctgcagaaatacccc
tttaaaggtggcggctgctacctgctgctgggcatggtagaggtagactttcatttccct
acgataaccgttttaatgatggcaaaaatgccttttattccggatccgcgctacgccctg
gataaagaaaaatcttacgaggtccaccggaagatcagtgaagatgtgagcatgacatgg
cgtgcgccctatccgcaggagcatgaaatcggtttgccaaggtttaagatgaaagagtga
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