Kaistella daneshvariae: EIB71_10360
Help
Entry
EIB71_10360 CDS
T06920
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kda
Kaistella daneshvariae
Pathway
kda03030
DNA replication
kda03430
Mismatch repair
kda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EIB71_10360
03430 Mismatch repair
EIB71_10360
03440 Homologous recombination
EIB71_10360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kda03032
]
EIB71_10360
03400 DNA repair and recombination proteins [BR:
kda03400
]
EIB71_10360
Enzymes [BR:
kda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EIB71_10360
DNA replication proteins [BR:
kda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EIB71_10360
DNA repair and recombination proteins [BR:
kda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EIB71_10360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
DNApol_Exo
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AZI68045
LinkDB
All DBs
Position
complement(2218628..2223283)
Genome browser
AA seq
1551 aa
AA seq
DB search
MYLIFDTETTGLPKNFNAPITDSDNWPRMVQIAWQLHANDGTLLENQDYIIKPEGYDIPF
SSQRIHGISTKIAKEEGRDLGEVLDEFREAVNKAKVVIGHNIIFDYNIVGAEFFRKQMEN
NLQSLSFADTMEIGTDFCQLGGGKSGKFKSPKLEELYEKLYGEKFDEAHNAAADVNATAQ
VFFEMKRIGIIPPETLKISQIELQQFVTSHPNPIQPFPIVIRRQVAASKSKKNTVHFGDT
DEIEIGRYFNFHNHSIYSSLQASTNIGELISKALENNFPAVGIVDLGNMMGAFKFISEVE
KANSAIKKNYGEYQVKKEKAEEEGTIFNEVEPRKNPLIPIIGCEFYLSDRPEQKQFTKDD
PDRRTNMVLLAKNFEGYKNLAKLSSLGFVNGFYFGVPRISKQMVAEYKENLIAVTSGIAG
DIPNTIMEFGEQKGEELFQWWKETFKDDFYVQLQNHELEEEEYLNDVLLRFAEKYEVKFL
AQNETFYTEKSEAHIQDILYCIKDGEKLSSPVGKGFGKRRGLPSQEFYIKNTEEIKQSFR
QFPDAFEAYDEFLAKFQPFTLKRDVLLPEFKIPAKFQSSADEIDGGKRGENAYLRYLTYE
GAAARYSEITDEIRERLDFELEVIANTGYPGYFLIVQDFCNEARKMGVWVGPGRGSAAGS
AVAYCTGITNVDPIKYDLLFERFLNPERISMPDIDIDFDDEGRDKIIKWVVEKYGKNNVA
QIITYSVLGGKSAIKDAGRVLDVSISETNNIAKLVPTTPGMNIAKAFAKFEKLAPEDKML
AQEMKDILANPQDERYEVLAAAQKMEGCIRNTGIHACGVIITPEDISNLVPITIASKDAD
ILVSQFDNSVAESAGLLKMDFLGLRTLTIIKHAIKLIKQKHGIEIDPDTIPLDDAKTYQL
FKEGRTIGIFQYESPGMQKYMRELKPTEFADLIAMNALYRPGPIKYIPLFINRKNGVEET
VYDLEETEEYLKETHGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKQRDVLDKMYPK
FIEGGKSNNLDETKLNKIWKDWEAFAEYAFNKSHSTCYALIAYQTAYLKANYPAEYMASV
MSNNINNTKQITLFMEDCKAIGVDVLGPDVNESQYAFAVNEKGQIRFGLGAIKGIGEGPS
EAIVEARKTGRFKNIYDFFERIPTSQMNKRVAESLVVAGAFDEVDRYHRAQYFDIDNSGK
TNVERLIRYGQSFQDNKNEIENSLFADFADEVQIEQPKLNPAPEWQNMHKLNKEKEIIGF
YLSAHPLDEYKYQYQFLQGALSKKAILEGKKEETVELEKVVLPLEISGGEESDEDALDLP
AEILGEDEQLIEEPTKIVEPRGNFNFLNLDEIESYKNSVFGNNQPNLFNNDKLTWKEKQA
MKNNTPEYMVAGLVTEYTIKDGKNSGEKVAFLMLEDYSGSYSFRLGDRDYMKFRDKIDVQ
RFVIFKVKFSQANDGRVFVNITDVTDLKEAFEKFAKKMTVVVDVNDLRKEDIEFFRNQFG
EHKGEQKLNFFIKNPADESQIEVMSMQTMIQVNGDLIGVFNEMQKYQIFLN
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgattttcgataccgaaactacaggtttacctaaaaatttcaatgctccgatt
accgactccgacaactggccacgaatggtgcagattgcatggcagttgcacgcaaacgat
ggaacgctacttgaaaatcaagattatatcatcaaacctgaagggtacgatattccgttt
tcttcccaaagaattcacggaatttccacaaaaatcgcaaaggaagaagggcgtgattta
ggcgaagttttagatgaattccgcgaagcggttaataaagctaaagttgtcatcggtcac
aatattattttcgattataatattgtgggcgcggagtttttccgtaagcagatggagaat
aatctacaatctttatcttttgctgatacgatggaaatcggtaccgatttttgccagtta
ggaggtgggaaaagcggaaaatttaaatctccgaaactcgaagaactttacgaaaagttg
tatggcgaaaaattcgacgaagcgcataacgccgccgccgacgtgaatgccacagcccaa
gtctttttcgagatgaagcgcattggaattattccgcctgaaacgcttaaaatttcgcaa
attgaactgcagcagtttgttacttcgcacccaaacccgatacaacctttcccgattgtt
attcggcgtcaggttgccgcttcaaaatcgaaaaagaataccgttcattttggtgacacc
gatgagattgaaatcggcagatattttaattttcataatcacagcatttattcttcgctt
caggcttcaacaaatattggcgaattgatttctaaagcgcttgaaaacaattttccagcg
gttggcatcgtggatttgggcaatatgatgggcgccttcaaatttatttccgaggttgag
aaggccaatagtgccattaagaaaaattacggggaataccaggtaaaaaaagagaaagcg
gaagaggaaggaactatttttaatgaagttgagccgcgcaaaaatcctttgatcccaatt
atcggttgtgaattttatctttcggaccggccggaacaaaaacaatttacaaaagatgat
cccgatcgccgcaccaacatggtgcttttagcaaagaattttgaaggatataaaaatctc
gcaaaactttccagcttgggctttgttaacggattttatttcggtgttccgcggatttca
aagcaaatggttgcggaatacaaggaaaatttgattgctgtaacctcaggaattgccggt
gatatcccgaacaccattatggaatttggggagcagaaaggtgaagagcttttccagtgg
tggaaggaaacttttaaagatgatttttatgttcagcttcaaaatcatgagctggaagag
gaggaatatttaaacgacgttttgctgcgttttgccgaaaaatacgaggttaaattttta
gcacaaaacgagactttttataccgaaaaatccgaggcgcatattcaggatattttgtac
tgcattaaagatggcgaaaaactttcgtcgccggttggaaaaggttttggtaaaagacgc
ggattgccttctcaggaattttacattaaaaataccgaggaaattaagcaaagttttcga
caatttccggatgcttttgaagcgtacgacgaatttttagcgaaattccaaccctttaca
ttaaaaagagatgttttgctgccggagtttaaaattcccgcaaaatttcaaagttctgct
gatgaaattgatggtggcaaaaggggcgaaaatgcctacttacgatatttaacctacgaa
ggtgccgctgcacgatattccgaaataacggacgaaatccgtgaaagacttgattttgaa
ctggaagttattgcaaatacgggttatccgggttactttttgattgttcaggatttctgt
aacgaagcgcggaaaatgggcgtttgggtaggcccggggcgtggttctgcagcgggttcc
gcggtcgcatattgcaccggaattacaaacgttgatcctattaaatatgaccttcttttt
gagcgttttctgaatcctgaacgtatttcaatgccggatatcgatatcgatttcgatgat
gaaggccgcgataaaatcattaaatgggttgtagaaaaatatggtaaaaacaatgtggcg
caaatcatcacctattcggttttaggtggaaaatctgcgattaaagatgccggacgcgtt
ttagatgtttcgatttctgaaactaataatatcgcaaaactggttcctacaacaccagga
atgaatatcgccaaagcttttgcaaaattcgaaaaactggcgcccgaagataaaatgctt
gcgcaggaaatgaaggatattttggcaaatcctcaggatgagcgttacgaagttcttgcc
gctgctcagaaaatggaaggctgcattcgaaacaccggaattcatgcctgtggtgtgatt
attacgccggaagatatttcgaatttggttccgatcaccatcgcctcgaaagatgccgat
attttagtctcgcaattcgacaattccgtcgcggaaagcgccgggttgcttaaaatggac
tttttaggtttaagaactttaaccattattaagcacgcgattaagctcattaagcaaaaa
cacggtattgaaatagatccggataccattccgctggatgatgcaaaaacttatcagctt
tttaaagagggtagaacaattgggattttccagtatgaaagtccgggaatgcagaagtat
atgcgtgagctgaaacctacggaatttgcggatttgattgccatgaacgcgctgtacaga
cctggaccaattaaatatattccgctcttcatcaaccgtaagaacggagtggaagaaacg
gtgtatgaccttgaagaaaccgaggaatatttaaaggaaacgcacggaattacggtttat
caggagcaggtaatgttgctttcgcaaaaactcgccaatttcaccaaaggtgaagccgat
actttgaggaaagccatgggtaaaaaacagcgtgatgtgctggataaaatgtacccaaaa
ttcatcgaaggtggaaaaagcaataatcttgatgaaaccaagcttaataaaatctggaaa
gactgggaagcttttgcggaatacgcttttaataaaagtcactccacctgctacgcgctg
atcgcttatcaaaccgcttatttaaaagccaattatccggcagaatacatggcgagtgta
atgtctaataacattaacaataccaagcaaatcaccctgttcatggaagattgcaaggca
ataggtgtggatgttttgggaccggatgttaacgaatcgcaatatgcttttgcggtgaat
gaaaaagggcagatccgttttggtttgggtgcaattaaagggattggtgaaggtccgagt
gaagcgattgttgaagcacgaaaaacgggaagatttaagaatatttatgatttcttcgaa
cgcattccaacttcgcagatgaacaaaagggttgcagaaagtcttgtggtggccggtgct
ttcgacgaggtggatcgatatcaccgtgcgcaatattttgacattgataattccgggaaa
acaaatgtcgaacgcttaatccgctacggacagagttttcaggataacaaaaacgaaatt
gaaaattcgctttttgctgattttgcggatgaagtccaaattgaacagccgaaactgaat
ccggcgccggaatggcaaaacatgcacaaactcaataaagaaaaggaaattataggtttt
tatctctctgcgcatccgttggacgaatacaaatatcagtatcagtttttgcagggcgca
ctcagcaaaaaagcgattttagaaggtaaaaaagaagaaacggtagaactggaaaaagta
gttttaccgctcgaaatttctggaggtgaagaaagcgatgaagatgctttggatttaccg
gccgaaattttaggtgaagatgaacaactcatcgaagaaccgacaaaaatcgtggaaccg
cgcggaaactttaatttcctgaacctcgatgaaattgaaagttataaaaattcggttttt
gggaataatcaaccgaatttatttaataatgataagctgacctggaaagaaaaacaggcg
atgaaaaataacacgccggaatatatggtcgccggtttggttacggaatataccatcaaa
gacggaaaaaacagcggcgaaaaagtagcctttttaatgctggaagattacagcggaagt
tattctttccgccttggagaccgcgattacatgaaattccgcgataaaattgatgtgcag
cgttttgtcatttttaaagtgaaattttcacaagccaacgacggtcgcgttttcgtaaat
atcaccgatgtgaccgaccttaaagaagctttcgaaaaattcgcaaagaaaatgaccgtc
gtagtcgatgttaatgatttacgcaaagaagatatagaatttttccggaaccagtttggg
gagcacaaaggcgaacagaagctgaactttttcattaaaaatccggcggatgaaagccag
attgaagtgatgagcatgcagaccatgattcaggtgaatggcgatttgatcggcgttttt
aacgaaatgcagaaataccagatttttctgaattag
DBGET
integrated database retrieval system
