Kaistella daneshvariae: EIB71_10720
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Entry
EIB71_10720 CDS
T06920
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kda
Kaistella daneshvariae
Brite
KEGG Orthology (KO) [BR:
kda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kda03032
]
EIB71_10720
03400 DNA repair and recombination proteins [BR:
kda03400
]
EIB71_10720
Enzymes [BR:
kda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EIB71_10720
DNA replication proteins [BR:
kda03032
]
Prokaryotic type
DNA Topoisomerases
EIB71_10720
DNA repair and recombination proteins [BR:
kda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EIB71_10720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Zea_mays_MuDR
Motif
Other DBs
NCBI-ProteinID:
AZI68111
LinkDB
All DBs
Position
2304758..2305882
Genome browser
AA seq
374 aa
AA seq
DB search
MNADIPSVDLITKISPAKIIKIMKDPVKSAKAVKLVYTNDGETLGISRRKRGKNFTYFLG
DEKVKDKEELERIKKLSIPPAWEDVWICALENGHLQATGIDAKRRKQYRYHPVWNALRNH
TKFYRMLQFGETLPTIRLQLEKDLSRRNLDKRKVLALVVSLMERTNIRIGNNIYEKLYGS
FGLTTLKDKHVNITGQKIKFSFKGKKGIYHDIDLKNRKLAKAVKNCRDIPGKELFQYYDE
DGKRHAIESGMVNEYIKEISGEDFTAKDFRTWSGTVNALIAFKEIESSAEPEEKTTQKSK
IKKAIELVACELGNTSTVCRKYYIHPLIINLYESNSIKKYLEELDDIEVDDGKSGLTKEE
KIVMKILTTEKLSV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagatattcccagcgtagatcttatcacgaaaatcagcccggcgaaaatcatt
aaaatcatgaaggacccggtaaaatctgcaaaagcggttaagctggtgtacactaacgat
ggcgaaaccctgggaatttcccggcgcaaaagaggcaaaaatttcacttattttctcggt
gatgaaaaagtaaaagataaggaggaactggagcgaattaaaaaactctccattccgcct
gcgtgggaagatgtctggatttgcgcccttgaaaacgggcatttacaggcaaccggaatt
gatgcaaagcgccgaaagcaataccgctatcacccggtttggaatgcactgcgaaatcac
acgaaattttaccgtatgctgcagtttggtgaaactttaccaactatccggcttcagctt
gaaaaagacttatcacgtagaaacctcgataaaagaaaggttttggcactcgtggtcagt
ttgatggaacgcaccaacatccgcatcggaaataatatttatgaaaaactgtacgggtca
tttggccttaccacgctgaaagataaacacgtaaatattaccgggcaaaagataaaattt
tcctttaaaggcaaaaaaggtatttatcacgatattgatcttaaaaaccgaaaactggca
aaagcggtgaaaaactgccgcgacattccaggaaaagaactttttcaatattacgatgaa
gatggaaaacgtcacgctatagaaagcggtatggtgaatgaatatatcaaagaaattagc
ggcgaagattttaccgcgaaagatttccggacgtggtcgggtacggtgaatgcgttgata
gcttttaaagaaatcgagtcttcagcagaaccagaggaaaaaaccacgcaaaaatccaag
attaaaaaagcgattgaactggttgcctgcgaactggggaatacaagcacggtttgccgg
aaatattatattcatccgctgatcatcaacctttacgaaagcaactccattaaaaaatat
ctggaagaactcgacgatattgaggtcgatgacggaaaatccggcttgacgaaagaagaa
aaaatagtgatgaaaattctcacgactgaaaaacttagcgtttaa
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