Kaistella daneshvariae: EIB71_10860
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Entry
EIB71_10860 CDS
T06920
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kda
Kaistella daneshvariae
Pathway
kda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIB71_10860 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kda03019
]
EIB71_10860 (recQ)
03400 DNA repair and recombination proteins [BR:
kda03400
]
EIB71_10860 (recQ)
Enzymes [BR:
kda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EIB71_10860 (recQ)
Messenger RNA biogenesis [BR:
kda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EIB71_10860 (recQ)
DNA repair and recombination proteins [BR:
kda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EIB71_10860 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AZI68137
UniProt:
A0ABN5T4V2
LinkDB
All DBs
Position
complement(2335428..2337632)
Genome browser
AA seq
734 aa
AA seq
DB search
MKTTRTDLSKELKKYFGFSTFKGQQETIIKTLLEGEDVFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAINGLSSVEGVAHVLNSSLNKTQTKQVFDDIRSGVTKLLYVA
PESLIKEEYQEFLKEVKISFVAIDEAHCISEWGHDFRPEYRNLKSIIDKIADVPVIALTA
TATPKVQDDIQKTLGMNNAVVFKESFNRPNLFYEVRPKVNIDREIVKFINARKGKSGIVY
CLSRRKVEEFAQVLQVNGINALPYHAGLDQKTRVMNQDKFLMEEADVIVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGYCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYVETSMSRRQYILYYFGEQFDPKNGLGAEMCDNAVNPPVLKDASNELITL
LQLVKDLEEKFKTKDLIAVIVGKENPVTKSYKLETTKHFGIGKKENENFWKTIIRQATVQ
NFLQKDIETYGVLKLTEKGQKALAEKKENIFFIAEDREYNLEQTKANADKGQSQASGGLD
EVLFSQLKELRKTVAKKLGKPPYTIFMDPSLEDMTVQYPITVEEIGNIYGVGDGKAKKYG
KEFAEFIKKYVEDNHIERTQDMVMKTVANKSSHKVFIIQSTDKKIDLEDIAKAKNLSMDD
LLKEMERIVYQGTKLNIDYYIDENFDEDIVEDFMSFMGESESDSMKILLADFGDDLSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacccgtaccgatttatccaaagagctcaagaaatatttcggtttttctaca
tttaaaggtcaacaagaaaccattataaagacgctgctggaaggtgaagacgtgttcgtg
ctgatgccaaccggtgggggaaaatcactttgctatcaattgcccgccctgatttcggaa
ggaacagcaatcgttgtttcaccgctcatcgcgctgatgaaaaaccaggtggatgccatc
aacgggctttcctctgtggaaggcgtggcgcatgtgctgaattcttctttaaataaaacc
cagaccaaacaggtttttgatgatatccgatctggcgtgaccaaactcctgtacgttgcg
ccagaatctttgattaaggaggaatatcaggaatttttaaaagaggttaaaatttcgttt
gtcgccatcgacgaagcacactgtatttcggagtggggacatgatttccgcccggaatac
cggaatctaaaatcgataatcgataaaatagcagatgttcccgtgatcgctttaactgca
acagcgacgccaaaagttcaggatgatatccagaaaaccttgggaatgaataacgcggtg
gttttcaaggaaagctttaaccgtccgaaccttttttatgaagtaagaccaaaagtaaat
atcgaccgagaaattgtaaaattcatcaatgcacgaaaaggtaaatccggaattgtgtac
tgtttaagccgccgaaaagtggaagaatttgcgcaggtgttgcaggtaaatggaattaat
gctttgccgtatcacgcagggttagaccagaaaacgcgcgtcatgaatcaggacaaattt
ctgatggaagaagctgatgtgattgttgcgacgattgctttcggaatgggaatcgataaa
cccgatgtgcgttttgtaatccattacgacataccgaaatcgctggaaagttattaccag
gagaccggccgcgccggaagagatggcggtgaaggatattgtctggcattttatgacccg
aaagatattgagaaacttgaaaaatttttagcgcaaaaacctgtatccgagcgcgaaatt
ggtttgcagcttttaaatgaagtcgtaggctatgtagaaacttccatgagccggcgacaa
tatattctgtattatttcggtgaacagttcgatccgaaaaacggcttgggtgctgaaatg
tgcgacaacgcagtaaatccgccggtgctgaaagacgcttccaacgaactcattacgctt
ttacagttggtgaaagatttagaagaaaaatttaaaaccaaagatttaatcgcggtgatt
gtcggtaaagaaaatccggttacaaaatcgtataaattagaaaccacgaagcattttggc
atcgggaaaaaagaaaacgaaaacttctggaaaacaattatccgccaggcgacggtgcag
aatttccttcaaaaagatattgaaacctacggcgttttaaaacttacagaaaaaggacag
aaagcacttgcagaaaagaaagaaaatatattttttattgccgaagaccgcgaatacaac
ctggaacaaacgaaagcaaatgctgataaaggtcaatctcaagcaagcggcggactggat
gaagttttgttttcgcagttgaaagaactccggaaaaccgttgcaaaaaaacttggaaaa
ccaccttataccatttttatggatccgagtttggaggatatgacggttcaatatccaatt
acggttgaggaaattgggaatatttacggcgttggcgacggaaaggcgaaaaaatacggg
aaggaattcgcggaatttatcaaaaaatacgttgaagataatcatatcgagcgcacgcag
gacatggtgatgaaaaccgtggctaataagtcgagccacaaggtttttatcattcaaagt
accgacaaaaaaattgatctggaagatattgccaaagcaaaaaatctttcgatggacgac
cttctgaaagaaatggaaagaattgtttatcagggaactaaattgaatattgattactat
atcgacgaaaattttgacgaagatattgtcgaagatttcatgtcttttatgggcgaaagt
gaaagcgacagcatgaaaatattgctggcggactttggcgatgatctaagcgacgaagaa
gttcggatgttgcgtattaaatttatctcagacgtagcaaattaa
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