Kaistella daneshvariae: EIB71_11325
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Entry
EIB71_11325 CDS
T06920
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kda
Kaistella daneshvariae
Brite
KEGG Orthology (KO) [BR:
kda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kda03016
]
EIB71_11325 (truB)
Enzymes [BR:
kda01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EIB71_11325 (truB)
Transfer RNA biogenesis [BR:
kda03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EIB71_11325 (truB)
Prokaryotic type
EIB71_11325 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AZI68223
UniProt:
A0ABM7CB22
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All DBs
Position
complement(2436962..2437660)
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AA seq
232 aa
AA seq
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MTDTDFLEGQIILVDKPLDWTSFQAVNKLKYKLKSEFNLPKKFKIGHAGTLDPRATGLLI
VCTGKFTKIIPEIQDAPKEYLAEIKIGVQTESYDTEKPEIFPQDISGITENHITETLAKF
IGEIDQKPPVFSAIKIDGNRAYDLARKGKEVEMKSRKITINYIENIEIDLPFVRFTVGCS
KGTYIRSLAHDIGQELGVGAYLTNLRRTKIGEYSIENASSEYLENDYSFQNF
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgactgataccgattttttagaaggccaaatcattctcgtcgacaaaccgctggactgg
acgagctttcaggcggtaaataaactgaaatataagctgaaaagcgaattcaaccttccg
aaaaaattcaaaatcgggcatgcaggaactttagatccacgcgctacagggcttttaatc
gtctgcaccggaaaattcaccaaaataatcccggaaattcaggacgcgccaaaagaatat
ttagcagaaataaaaatcggcgtacaaaccgaatcttacgacaccgaaaaacctgaaatt
tttcctcaagacatttccggaattaccgaaaatcacattaccgaaactttagctaaattt
atcggtgaaatcgaccagaaaccgcccgttttttccgccatcaaaattgatggaaaccgc
gcctatgatttagcgcgcaaaggaaaagaagtcgaaatgaaatcccgaaaaatcaccatc
aattacattgaaaatattgaaattgatttaccgtttgttcgtttcacggtcggttgttcc
aaaggaacttatattcgcagtctggcccacgatatcggtcaggaattaggcgtcggcgcg
tatctgaccaatttaagacgaaccaaaatcggtgaatattccatcgaaaacgccagctcc
gaatatttggaaaatgactacagttttcagaacttttaa
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