Candidatus Kinetoplastidibacterium desouzai: CDSE_0016
Help
Entry
CDSE_0016 CDS
T02465
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
kde
Candidatus Kinetoplastidibacterium desouzai
Pathway
kde03030
DNA replication
kde03430
Mismatch repair
kde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDSE_0016
03430 Mismatch repair
CDSE_0016
03440 Homologous recombination
CDSE_0016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kde03032
]
CDSE_0016
03400 DNA repair and recombination proteins [BR:
kde03400
]
CDSE_0016
Enzymes [BR:
kde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDSE_0016
DNA replication proteins [BR:
kde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDSE_0016
DNA repair and recombination proteins [BR:
kde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDSE_0016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AGF47142
UniProt:
M1LN50
LinkDB
All DBs
Position
complement(675240..675950)
Genome browser
AA seq
236 aa
AA seq
DB search
MRQVVFDLETTGLDVSKGHRIIEIGCVELSNRSITGVDLHLYVNPDREIDPGALAIHGLT
NDFLSDKPKFRDIVDKFLAFIKGAEIIAHNASFDVKFLNYELGKLNLGNLDQYCDKIIDS
LSLARELRPGKRNSLDALCDYYGVSNLERKFHGALLDSKLLSHVWLAMTRGQEEFTIVEN
NYKKKTHSNKLVKDSHHYHCPIIKATKDEINDHHQYLLDMKKNTSEPILWHLLEED
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagacaggttgtatttgatcttgaaactactggattggatgtatcaaaaggacatcgt
attatagagatagggtgtgttgaattaagtaatcgtagtattactggagtggacttacat
ttatatgtcaatcctgatagagaaatagatcctggggcattagctattcatggtttgact
aatgattttttgtctgacaaaccaaaattcagagatatagtggataagtttctagctttt
attaaaggagcagagattatagctcataatgcgtcctttgatgttaaatttctgaattat
gagttgggcaagttaaatttaggcaatttagatcagtattgcgataaaattattgattca
ttgtctcttgctagagaattacgtccaggtaaacgtaattctctagatgctctatgtgat
tactacggagtatcaaatttagaacgaaaatttcatggtgctttattggattcgaaactg
ttatcacatgtctggttggctatgactagaggacaagaagaatttactattgttgaaaat
aattataagaaaaagactcattctaataaattagtaaaagattcacatcattatcattgt
cctataataaaagcaacaaaagatgagataaatgatcatcatcagtatttattagacatg
aagaaaaatacttcagagccaattttatggcatttattggaagaagattag
DBGET
integrated database retrieval system
