Candidatus Kinetoplastidibacterium desouzai: CDSE_0047
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Entry
CDSE_0047 CDS
T02465
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kde
Candidatus Kinetoplastidibacterium desouzai
Brite
KEGG Orthology (KO) [BR:
kde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kde03016
]
CDSE_0047
Enzymes [BR:
kde01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CDSE_0047
Transfer RNA biogenesis [BR:
kde03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CDSE_0047
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AGF47168
UniProt:
M1L337
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All DBs
Position
704848..706767
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AA seq
639 aa
AA seq
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MKMHVLYEENGNFKTAIILSKTDANFLVETEHGKKIKLKINNCLLHFTSPKPNELLEQAA
TISNEMDIVFLWECAPQEIFFASDLAIEYFGNKPSPIELTSILIKLHNAPIYFYKKGQGQ
YIKATEEKILLALASIKKKKQLEEEEEYLTSQLVNGYLPDIIKQQALSLINNPDKKSIYW
KALEKACNQLNKNPETLLIDINAWPNYLTLLKEKFIYNNFPNGVIIKEDNFIDINLDKDI
PISNAEIYSIDDINTTEIDDGISIRKIENNTITIGIHIAAPALGIIPGSQYDSIARARSS
TIYMPGEKITMQPEKIIKIFSLDANKLVPAISLYVTINSIDGSIIEYESLIEQVSVKENL
RINLIEEIATKSNIENSNITNPLLEWIRPLWKTSQLLSLQREKTRGSPENLSRQEYSFTI
DGDPNNPSSKIYIEKRPRDNPISIIVAEFMILANSLWGQMLKQHGVPGIYRSQQSFGRVK
MSTSPLPHDKIGVSQYIWSTSPLRRYIDLVNQWQIISVIKHNVSARLVCPFKIRDNNLFS
IIQEFETKYNSITCFQNEIENYWSIQWLIQQKIEITTATFIKESIARLNDVPLIVHVFNL
PITIIKGELIKVKVININEISMEVNVQYIDTIINTDSNI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcatgtgctttatgaagaaaatggaaactttaagacagcaatcatactctca
aaaacagatgccaattttttggtagaaactgagcatggaaaaaaaataaaacttaaaata
aacaattgcttattacattttacatcacctaaaccaaatgaattattagaacaagcagct
actatctctaatgaaatggatatagtttttttatgggaatgcgcaccacaggaaatcttt
tttgcaagtgatcttgcgattgagtactttggaaacaaaccatctcctatagaactaact
agtattttaataaaattacataatgctcctatttatttttataaaaaaggacaaggtcaa
tacattaaagccacagaagaaaaaatattattagcactagcatctattaagaaaaagaaa
caactagaggaagaagaagaatatctaacatcacaacttgtaaacggatatctaccggat
ataataaaacaacaagcattaagtttaatcaataatcctgataaaaaaagcatatattgg
aaagccctagaaaaagcctgtaatcaattaaataaaaacccagaaacattacttatagat
ataaacgcgtggccaaattacctaactctattgaaagaaaaatttatttataataatttc
ccaaatggagtaataattaaagaagataactttattgatataaatcttgataaagatata
cccatatctaatgctgaaatttactctattgatgatattaacaccacagaaattgatgat
ggtatttctataagaaaaattgagaataacactataacaataggtatccatatagcagct
ccagccttaggaataattcctggcagtcaatatgatagtatcgcaagagcaagatcttct
actatatatatgcctggagaaaaaataactatgcaaccagaaaaaataataaaaatattt
tctcttgatgccaacaaattagttccagctatatctttatacgttactattaatagtatt
gatggatcaataattgaatatgaatcactaattgaacaagtatcagtaaaagaaaatcta
cgaataaacttaatagaagagatagccacaaaatcaaatatcgagaattctaatataact
aatccattacttgagtggataagacccttatggaaaacaagtcagttgttatcattgcaa
cgtgaaaaaacaagaggatcgccagaaaacttatcaagacaagaatactcatttacaata
gatggagaccccaataatccatcatcaaaaatttatatagaaaaacgaccaagggataac
ccaatcagcattatagtagctgagtttatgattctagcaaatagtttgtgggggcaaatg
ttaaaacaacatggagtacctggaatatacagatctcaacaatcatttggaagagtgaaa
atgagcacttctccattacctcatgataaaattggtgtttctcaatacatatggagcact
tcccctctaagaagatatatagatttagtcaatcagtggcaaattatatcggtaataaaa
cacaatgtatctgcaagattagtatgtccatttaaaataagagataacaatttatttagc
ataattcaggaatttgaaacaaaatataattcaatcacttgcttccaaaatgaaattgaa
aattattggtctatacaatggcttatacaacaaaaaatagaaataactacagctactttc
ataaaagaatcaattgccagattaaacgacgttcctcttatagtccacgtatttaatctt
cctattacgataataaaaggagagcttataaaagtaaaagttataaatattaatgaaata
tccatggaagtaaatgttcaatatatagatacaattatcaatactgattctaatatttaa
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