| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
kde Candidatus Kinetoplastidibacterium desouzai
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:kde00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDSE_0187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:kde03021]
CDSE_0187
03400 DNA repair and recombination proteins [BR:kde03400]
CDSE_0187
Enzymes [BR:kde01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDSE_0187
Transcription machinery [BR:kde03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDSE_0187
DNA repair and recombination proteins [BR:kde03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDSE_0187
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(812240..816427)
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| AA seq |
1395 aa
MKALLDLFKQVSQDEQFDAIKVSVASSEKIRSWSYGEVRKPETINYRTFKPERDGLFCSK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTSAKVRRERMGHVELASPVAHIWFLKSL
PSRLGMILDMTLRDIERVLYFEAWCVVDPGMTPLKRGQIMSDDDFVSKVEEYGDEFKALM
GAEAIRDLLRNINIEREIQILRDELKVVSSESKIKKISKRLKIIEGFQKSDIKPEWMILE
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELKAPEIILRNEKRMLQ
ESVDSLLDNGRRGKAMTGANKRQLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGIPKLMALELFKPFIFNKLESMGFANTIKSAKKMVENQEPVVWDLLEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEA
RTLMLSSNNILFPANGEPSIVPSQDIVLGLYYATRERVNAKGEGMFFSSVSEVQRAYDVG
EVELHSRITVRINEHEIGDKNILQQSSKRYETTVGRALLSEILPKGLSFSVLNKTLKKKE
ISRLINQSFRRCGLRDTVIFVDNLMQSGFSLATKAGISIAMEDMLIPASKSTILSEASQE
VKEIDNQYSSGLVTSQERYNNVVDIWGKASDRVGKAMMEYLATEPVINRKGEEIRQESFN
SIYMMADSGARGSVAQIRQLAGMRGLMAKPDGSIIETPISANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVTQDLVIIEQDCGTSQGYAMKAIVEGGEVVETLRDRIL
GRISVVDIVDPDTRDVIIKAGSLLDEDLVDKIDLIGIDEVKVRTPLTCETRRGLCANCYG
RDLGRGELVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAALASVVETKSNGIVGF
MSTMRYVTNPKGERVVISRSGELAVFDENSRERERHKIPYGAILLVGDGESVNAGMLLAS
WDPLTRPIVSEYAGKVKFENIEEGATVAKQVDDITGLSTLVVITPKTRGNKVSMRPQIKL
INESGEDVKIAGTDIAGSITFPVGALITVRDGQHVSVGEILARIPQESQKIRDITGGLPR
VAELFEARSPKDAGMLAEVTGTVSFGKDTKGKQRLVITDLDGMTHEFLITKEKQILVHDG
QVVNKGEIIVDGPVDPHDILRLQGVDSLASYIIDEVQDVYRLQGVKINDKHIEVIVRQML
RRVNIINPGDTTFIPGEQVERSDLLNENDRVNSNNGIPATYDNILLGITKASLSTDSFIS
AASFQETTRVLTEAAIMGKKDDLRGLKENVIVGRLIPAGTGLSYHKARKAKIILNEAEKA
SAIEKASPFEKQVSQ |
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| NT seq |
4188 nt +upstreamnt +downstreamnt
atgaaggctctacttgacctttttaaacaagtctcacaagacgaacaatttgatgctatt
aaggttagcgttgcttcttcggagaaaattcgttcgtggtcttatggtgaggttcgtaaa
ccagaaactatcaattataggacatttaagccagaaagagatggtttattttgttcaaaa
atatttggtccaattaaggattatgaatgtttgtgtggcaaatataaacgtcttaaacat
cgtggtgttatttgtgaaaaatgtggagtggaagttacatcagctaaagtacgacgtgaa
agaatgggtcatgttgaacttgctagtcccgttgctcatatttggtttttgaaaagttta
ccatctagattgggtatgattctagatatgactttgagggatatagaacgagttttatat
tttgaagcttggtgtgttgttgatcctggaatgactccattaaaacgcgggcaaataatg
tctgatgatgattttgtttccaaggttgaagagtatggtgatgaattcaaggcattaatg
ggggcagaggctataagggatcttttgcgtaacattaacatagaacgagaaattcaaatt
ttaagagatgaactgaaggtagtttcttctgaatcaaaaattaaaaaaatatccaaacgt
ttgaaaataattgaaggttttcaaaagtcagatattaaaccagaatggatgattctagaa
gttcttcctgtgttacctccagatcttagacctcttgttcctttggatggtggtagattt
gctacttctgatttaaatgatttatatcgtagagtaattaatcgtaataataggttaaaa
agattaatagaattaaaagctcctgaaattattctaagaaatgaaaaaagaatgttgcaa
gaatctgtagattctttgttggataatggtaggagaggtaaagctatgactggcgctaat
aagcgtcagttaaaatctttagctgatatgattaaaggtaaaggtggtagattccgtcaa
aacctactaggtaaacgtgttgattattcaggtagatcagttatagttgtaggtccgcaa
ttaaaacttcatcagtgtggtattccaaaacttatggctttagagttatttaaaccattc
atttttaataaattagagtcaatgggttttgctaacactattaaatcagctaaaaagatg
gtggaaaatcaagaaccggttgtttgggatcttttagaggaagttataagagagcatcct
gtaatgttaaacagagctccaactttacatcgtttaggtatccaagcttttgagccagtt
ttgatagaaggtaaagcaatacaattacatccacttgtttgtgcggcatttaatgctgac
tttgacggcgatcaaatggcagttcatgttccattgtcattagaggcgcaattagaagct
agaacattaatgttatcttcaaataatatattgtttcctgctaatggtgagccttctata
gtgccttctcaagatatagttttaggtttgtattatgctactagagaaagagttaatgca
aaaggggaaggaatgtttttctcaagtgttagcgaggttcaaagagcttatgatgttggt
gaggttgagttgcatagtcgtatcactgttcgtatcaatgaacatgaaataggtgataaa
aatattttgcaacaatcaagtaagcgttatgagacaactgttggtagagcattattgtct
gagatcttacctaagggtttatcattttctgttttaaataaaactttaaagaagaaagaa
atttctcgtttaataaatcagtcgtttagacgttgtggtttgcgtgatactgttattttt
gttgataatttgatgcagtctggttttagtcttgcaacaaaagctggaatttctatagct
atggaagatatgttaattcctgcatctaaatctactattctgtcagaagctagtcaagaa
gttaaggaaatagataatcaatattcttcaggtttggttacttcgcaagaaagatataat
aatgtagtagatatttggggtaaagctagtgatagagtaggtaaagccatgatggaatat
ttggctacagagccagttataaatagaaagggtgaagaaattcgtcaagagtcttttaat
tctatttatatgatggctgattctggtgctcgtggttctgttgctcaaattcgtcagtta
gctggaatgcgtggtcttatggctaaacctgatgggtcgattattgaaactccaattagt
gccaattttagagaaggtctaaatgttcttcaatattttatttctactcatggtgctcgt
aaaggacttgctgatacagctcttaaaactgcaaattctggttatttgactagaagattg
gttgatgtgacacaggatctagttattattgaacaagactgtggaacatcgcaaggctat
gctatgaaggcaatagtagaaggcggagaggttgtagaaacattaagagatagaatatta
ggtcgtatatctgttgtggatattgtagaccctgatacaagggatgttattataaaagct
ggatctttactggatgaagatttggtagataagatagatcttataggaattgatgaggta
aaggttcgaactcctcttacttgtgaaacccgtagaggtttatgtgctaattgttatggt
agggatttaggtagaggtgaattggttaatataggagaagcagttggtgttattgctgct
cagtctataggagaaccaggaactcagcttactatgagaacattccatataggaggtgcc
gcttctcgtgctgccttagctagtgttgttgagacaaaatctaatggtattgttggattt
atgagtactatgaggtatgttactaatccaaaaggagaaagggtagttatttctcgctct
ggggaattggctgtttttgatgaaaactcaagagaaagagaaaggcataaaataccatat
ggtgcaattttattggttggtgatggagaaagtgttaatgctggaatgcttctagcatct
tgggatccgcttactcgtccaattgtttcagaatatgctggtaaagtgaaatttgaaaat
attgaagagggagcaactgtagctaagcaagtagatgatataacaggattgtcgacatta
gtggttattactccaaagactagaggtaataaggtttccatgagacctcaaatcaagctt
ataaatgaatctggagaagatgtaaaaattgctggaacagatatagctggtagtataact
tttcctgttggagcattaattactgttcgtgatggtcaacatgtttctgttggtgaaatt
ttagctagaattccacaagaatctcaaaaaatacgtgatattacaggaggtttgcctaga
gtagctgaattgtttgaggctagatctcctaaggatgctggaatgttagcagaagtgact
ggaactgtttcttttggaaaagatacaaagggtaaacaacgtttggttattacagattta
gatggtatgacccatgagtttctaattacaaaagaaaaacaaattcttgttcatgatggg
caagtagtaaataaaggcgagattatagttgatggtccagttgatcctcatgatatttta
cgtctacagggtgttgatagtttggcttcttatattattgatgaagttcaagatgtttat
cgtttacagggtgttaaaataaatgataagcatatagaagttattgttcgacagatgctg
cgtagggtaaatattattaatccaggtgatactacttttataccaggagagcaggttgaa
agatctgatttgttaaatgagaatgatagagtaaactctaacaatggtatacctgctaca
tatgataatatattactaggtataactaaagcttctctgtctacagattcatttatatca
gcagcttctttccaagaaaccacacgtgttttaactgaagctgctataatgggtaagaaa
gatgatttgcgaggcctaaaagagaacgtaatagttggtcgtttaataccagctggtaca
ggattatcatatcataaggctcgtaaagcaaaaattattcttaatgaagctgaaaaagct
agcgctatagaaaaggctagtccttttgaaaagcaggtaagtcagtag |
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