Candidatus Kinetoplastidibacterium desouzai: CDSE_0270
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Entry
CDSE_0270 CDS
T02465
Name
(GenBank) superfamily II primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
kde
Candidatus Kinetoplastidibacterium desouzai
Pathway
kde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CDSE_0270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kde03400
]
CDSE_0270
Enzymes [BR:
kde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDSE_0270
DNA repair and recombination proteins [BR:
kde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CDSE_0270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
SLFN-g3_helicase
Viral_helicase1
zf-IS66
Motif
Other DBs
NCBI-ProteinID:
AGF46619
UniProt:
M1LTH0
LinkDB
All DBs
Position
58668..60758
Genome browser
AA seq
696 aa
AA seq
DB search
MQNDQTELLKSYYWLNVAFRVPMGGLFEYKSESFIKLGSRVIVPFGKRTMIGIVVDHLIS
PTIDPKYIKNILDVIDDLPSLNEDWIRLIKFTADYYQRSIGDVVYSVIPSPLRTISSYNG
KRSKGGPVVRAYESKSGFSPKEYIYSNHNYELEEQQKRAIEIIVSSLGEFKTILVHGVTG
SGKTEVYLRSACHVLSMGKQVLFLVPEINLTPQLENAVRSHFANIISPEEILVVHSGISM
QKRVLSWAMMQRSQVKVVLGTRMSIFSPLSNLGLIVIDEEHDISYKQQSRLRYSARDVAI
WRAKDLGIPILLGSATPSLETWNHVNNKKYLLVSLDKRIKNICMPSIKLINTAKLPYSTV
LTKELQEAIDLRLQRKEQSLIFINRRGYAPVFHCYACGWVSSCSRCSVFTVLHVLKDRSY
RLQCHHCGLHSAIPRTCPICGNQDLKAMGLGTQSVEEELSLVFPQAKILRIDSDTARGSS
VKDLLSDVNNGEIDILIGTQMLSKGHNFTKVSLVGVINSDSMIFSQDFRASERLFAQLMQ
VSGRSGRYSNGEVIIQTSFPDHSVYQSLVSNDYIGFANNLLKERKKTLLPPFSFQALLTA
ESKNIETSIKFLEESKFIIEGITSKNLSYNNKIICYDPLPARVFRVANIEKAQLLIEGHS
RHILLSLLRNWLSLSSISFRKNNKVNWSIEIDPLEI
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgaccaaacagagttattaaagtcttattattggttaaatgtagcatttcgt
gttcctatgggtggtttgttcgaatataagagtgaatcatttataaaattaggttccaga
gttatagtcccatttgggaaaagaactatgataggtattgtagttgatcatttaatttcg
ccaactattgatcctaaatatattaagaatatattagatgttatagatgatttaccttca
ttaaatgaagattggataagattaataaaatttactgctgattattatcaaagatctatt
ggagatgtagtttattctgttataccatcaccattgagaactatttcttcttataatggt
aaaagatccaaaggaggaccggttgttcgagcttatgaaagtaaatcaggatttagccca
aaagaatatatttacagtaatcataattatgagctagaagaacaacaaaaaagagctata
gaaataattgtttcttcattgggtgaatttaaaacaattttagtacatggagttacagga
tcaggaaaaacagaggtttatttaagaagtgcctgtcatgtattatcaatgggtaaacag
gtcttgtttcttgtccctgaaataaatcttactcctcaattagaaaatgcagtgaggtca
cattttgcaaatataataagccctgaagaaatattagtagttcacagtggtatttcaatg
caaaagagagtactttcatgggcaatgatgcagcgttctcaggtgaaggttgtactaggt
actcgaatgtctatattttctccattaagtaatttgggtcttattgttatagatgaggaa
catgatatatcatataagcaacaaagtagattaagatattctgcaagagatgtggcgata
tggagagctaaagatttagggattcctatacttttaggttcagcaactccttcgttagaa
acttggaatcatgtaaataataagaaatatttattggtatctttagataaaagaataaaa
aacatatgtatgccatctataaaactaatcaatacagcaaagttaccatattctacagtt
ttaacaaaagagttgcaggaggctatagatcttagactacaaagaaaagaacaatctcta
atatttattaatagaagaggttatgctcctgtttttcattgttatgcatgtggttgggtg
agtagttgttctagatgtagtgtatttactgttttacatgttttaaaggatagatcatat
agattacagtgtcatcattgtgggcttcatagtgcaattccaagaacatgccctatttgt
ggtaatcaagatttaaaagcaatgggtttaggtactcagagtgtagaagaagaactgtct
ttagtttttccacaagcgaaaatattaagaatagattctgatacagcgagaggttctagt
gttaaagatttattatctgatgttaataatggagaaatagatattttaattggtacacaa
atgctctccaagggacataactttactaaagttagtcttgtgggagtaataaattcagat
tctatgattttttcacaagattttcgagcttcagagcgtttatttgctcaattaatgcaa
gtatcaggtagatctggccgttatagcaatggagaagttataatacaaacatcatttcca
gatcattcagtatatcagtcattagtaagtaatgattatattggatttgctaataatctt
ttaaaagaaagaaaaaagactcttttgccacctttttcattccaggcattattaacagct
gaatctaagaatattgaaacttcaataaagtttttagaggaatcaaaatttattatagaa
ggcattacatcaaagaatctttcttacaacaacaaaattatttgttatgatccattgcca
gcaagggtttttagggttgctaatattgaaaaggctcaactattaatagaaggtcatagt
agacatattttattatctcttttgcgaaattggttgtccttgtcgtctatttcttttaga
aaaaataataaagttaactggtctattgagattgatccattagaaatttaa
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