KEGG   Candidatus Kinetoplastidibacterium desouzai: CDSE_0322
Entry
CDSE_0322         CDS       T02465                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
kde  Candidatus Kinetoplastidibacterium desouzai
Pathway
kde03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kde00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CDSE_0322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kde03019]
    CDSE_0322
   03110 Chaperones and folding catalysts [BR:kde03110]
    CDSE_0322
   03029 Mitochondrial biogenesis [BR:kde03029]
    CDSE_0322
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:kde04147]
    CDSE_0322
Enzymes [BR:kde01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     CDSE_0322
Messenger RNA biogenesis [BR:kde03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CDSE_0322
Chaperones and folding catalysts [BR:kde03110]
 Heat shock proteins
  HSP60 / Chaperonin
   CDSE_0322
Mitochondrial biogenesis [BR:kde03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    CDSE_0322
Exosome [BR:kde04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CDSE_0322
  Exosomal proteins of other body fluids (saliva and urine)
   CDSE_0322
  Exosomal proteins of breast cancer cells
   CDSE_0322
  Exosomal proteins of colorectal cancer cells
   CDSE_0322
  Exosomal proteins of bladder cancer cells
   CDSE_0322
SSDB
Motif
Pfam: Cpn60_TCP1 NNH2
Other DBs
NCBI-ProteinID: AGF46662
UniProt: M1LLN4
LinkDB
Position
complement(110835..112502)
AA seq 555 aa
MAAKQVLFGDDARVRIVRGVNTLANAVKTTLGPKGRNVVIERSFGAPTVTKDGVSVAKEI
ELKDKIENIGAQLVKDVASKTSDSAGDGTTTATVLAQSIVQEGLKYVASGFNPIDLKRGI
DKAVAAAVEELKKQSKPITTNKEIAQVGSISANSDTSIGDIIAKAMDKVGKEGVITVEDG
KSLANELDVVEGMQFDRGYLSPYFINNPEKQVSALDDPYILIYDKKISNIRDLLPLLEQV
AKSSKPLLILAEDVEGEALATLVVNNIRGILKTTAVKAPGFGDRRKAMLEDIAILTGGVV
ISEETGMTLEKATLSDLGQAKRIEVGKENTTIIDGAGDSKSIEARVKQIRVQIEESTSDY
DREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALL
RAKQAISNLKGDTPDQNAGIRLILRAVEEPLRTIVSNAGEEASIVVNNVLNGKGSYGYNA
ATGEYTDLIAQGVLDPTKVTRTALQNAASVASLLLTAEAAIAELVEDKPTTPSMPSGMGG
MGGMGGMGGMGGMDF
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggcggccaaacaagttttattcggtgatgacgctcgcgtacgtattgtacgcggtgta
aatactctcgctaatgctgtaaaaacaacattaggacctaagggaagaaatgtagtaatt
gaacgttcatttggagcacctacagtaacaaaagatggtgtatcagtagccaaagaaata
gaactaaaagacaaaatagaaaatataggtgcacaattagtaaaagatgttgcatctaaa
acatctgatagtgctggagatggaacaactacagctactgtacttgctcaatctatagtt
caagaaggattaaaatatgtggcatctggatttaatcctattgatttaaaaagaggaata
gataaagcggtagctgctgcagtagaagaactaaaaaaacaatcaaaaccaatcactaca
aataaagaaattgctcaagttggatctatttctgctaatagcgatacttctataggtgat
atcattgcaaaagcaatggataaagttggtaaagaaggggttattacagtagaagatgga
aaatcattagccaatgagctagatgttgtagaaggtatgcaatttgacagaggttattta
tcaccttatttcatcaacaatcctgagaaacaagtatcagctctagatgatccatatatt
cttatatatgacaaaaagatcagtaacatacgtgatttattacctctattagaacaagtt
gctaagtccagcaaacctttattaattttagctgaagatgttgaaggtgaagctttagct
accttggtagtaaataatattagaggaatactcaaaactactgctgttaaagctcctggt
tttggtgatcgacgcaaagcaatgctagaagacatagctatccttacaggtggtgtggtc
atttctgaagaaacaggcatgacacttgaaaaagcaacactaagtgatttaggacaagct
aaacgtattgaagtaggaaaagaaaacactacaataattgatggtgctggtgattccaaa
tctatagaagctagagtaaaacaaattagagttcaaatagaagaatcaacatcagattat
gaccgtgaaaaactacaagaacgcgtagccaaactagctggaggggttgctgttattcgt
gttggagctgcaacagaagtagaaatgaaagagaagaaagctcgtgttgaagatgctctt
catgctactcgcgctgccgttgaagaaggtgttgttgctggtggtggagttgctttattg
cgtgccaaacaagctatttctaatttgaagggtgatacaccagatcaaaatgcaggaatt
cgcttaattctaagagctgtagaagaacctttgcgtactattgtctctaatgctggagaa
gaagcaagcatagtagttaataacgttctaaatggcaaaggcagctatggatataatgca
gctacaggcgaatatactgaccttattgctcaaggtgtattagatccaacaaaagttaca
agaacagccttacaaaatgctgcatctgtagcaagtcttttattaaccgcagaagcagct
atagctgaattagtagaagacaaacctacaactccatctatgcctagtggtatgggaggt
atgggcggtatgggtggtatgggcggtatgggtggtatggatttctag

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