Candidatus Kinetoplastidibacterium desouzai: CDSE_0336
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Entry
CDSE_0336 CDS
T02465
Name
(GenBank) bifunctional tRNA thiolation and methylation protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
kde
Candidatus Kinetoplastidibacterium desouzai
Brite
KEGG Orthology (KO) [BR:
kde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kde03016
]
CDSE_0336
Enzymes [BR:
kde01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CDSE_0336
Transfer RNA biogenesis [BR:
kde03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
CDSE_0336
Prokaryotic type
Methylthiotransferases
CDSE_0336
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Fer4_12
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AGF46674
UniProt:
M1LTP1
LinkDB
All DBs
Position
complement(124637..125992)
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AA seq
451 aa
AA seq
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MTNSKKETTNISKVHIKTFGCQMNEYDSKKIIDILRTHKNAELTSKVEEADIIILNTCSI
REKAQEKVFSDLGRIKEFKKNKPELIIGVGGCVASQEGSEILRRAPFVDIVFGPQTLHKV
SEMLDSRIKYNKPQIDISFPEIEKFDAMPPSTVEGPTAFVSIMEGCSKYCSFCVVPYTRG
TEISRPFEDVLIEVADLADNGVKEVTLLGQNVNAYRGQLNNTTNTADLAMLIEYIHEIPG
IERIRYTTSHPREMTKRIYEAYTNLPKLVSFLHLPVQSGSDRILSSMKRGYSAIEYKSII
RNLRIARSGLKISSDFIVGFPGETEIDFQKTLSLIEEIEFDTSFSFIYSPRPGTPAANIK
DTIQYDEKLNRLQRLQNLINTQAKNIANSMLGTVQKVLIEGKSKLNNNELMGRTENNRVV
NFVSFNNKIGDIVNIEITKVNSNTLRGKIIN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatagcaaaaaagaaactactaatatttctaaagttcatattaaaacttttggt
tgtcaaatgaatgaatatgactccaagaaaattattgacatattaagaacacacaaaaat
gcagaactaacaagcaaggttgaagaggctgatattataatattaaatacttgttcaata
agagaaaaagcacaagaaaaagttttttctgatctaggacgaattaaagaatttaagaaa
aataaaccagagcttattataggtgttggtggatgtgttgctagccaagaaggtagtgaa
atattaagaagagcaccatttgtagatattgtgtttggaccacaaaccttacacaaggta
tcagagatgcttgattctagaataaaatataataaaccacaaattgatatcagcttccct
gaaatagaaaaatttgatgctatgcctccttccactgttgaaggaccaacagcatttgta
tctataatggaaggatgtagtaaatattgtagtttttgcgttgttccttatacaagagga
acagaaatatctagaccattcgaagatgttttaatagaggttgcagatcttgctgacaat
ggagtaaaagaagtaactctactaggacaaaatgtaaatgcatacagaggacaactaaat
aatactactaataccgcagatcttgcaatgttaattgagtatatacacgaaataccagga
attgaaagaattagatataccacatctcatccaagagaaatgacaaaaagaatttacgaa
gcatatacaaatctacccaagttagtatcttttcttcatttgccagtacaatcaggaagt
gatcgtattttatcatcaatgaaaagaggatattctgcaatcgaatataaatcaattatt
agaaatttaagaatagccagaagtggtttgaaaatatcttctgattttattgttggtttc
ccaggagaaactgaaatagatttccaaaaaacactatcactaatagaagaaatagaattt
gatacctctttctcctttatatattctcctagacctggaactccagcagcaaacattaaa
gatacaatacaatatgatgaaaagctaaatagattacaaagactacaaaatttaataaat
acacaagcaaaaaatattgcaaattctatgttaggaacggttcaaaaagtattaatagaa
ggaaaatcaaaattaaataataatgagttaatgggtcgcactgagaataacagagtagtt
aattttgtttcctttaacaataaaataggtgatattgtaaacatagagatcactaaagtg
aatagcaatactttaagaggtaaaataattaattaa
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