Candidatus Kinetoplastidibacterium desouzai: CDSE_0431
Help
Entry
CDSE_0431 CDS
T02465
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kde
Candidatus Kinetoplastidibacterium desouzai
Pathway
kde03030
DNA replication
kde03430
Mismatch repair
kde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDSE_0431
03430 Mismatch repair
CDSE_0431
03440 Homologous recombination
CDSE_0431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kde03032
]
CDSE_0431
03400 DNA repair and recombination proteins [BR:
kde03400
]
CDSE_0431
Enzymes [BR:
kde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDSE_0431
DNA replication proteins [BR:
kde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDSE_0431
DNA repair and recombination proteins [BR:
kde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDSE_0431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF7444
Motif
Other DBs
NCBI-ProteinID:
AGF46752
UniProt:
M1LM10
LinkDB
All DBs
Position
222951..226418
Genome browser
AA seq
1155 aa
AA seq
DB search
MLENSKKSVSFVHLRVHSEYSIVDGLIKINDLVDGVIKLKQPAVALTDLSNLFGALKFYK
YSRSRGIKPVIGCDVWLSNDEDKSKPHRILILVRNNAGYLNLCNLITKSYLTNQTDGRVE
IRKEWLVSQEGLIILSGGIHGDVGHALRSGRKDLALSLIKQWKFMFPDSYYIEIQRSGLS
EEEEYIQLVVPISSDENIPIVATHPVEFLEKSHFKSHEVRVCIADGKHLTDVNKNHFFTE
KQYLLSSEEMIDLFADIPSALSNSIEIAKRCNINLQIGKPMLPNFEVRDDISLEFYLKQL
SSSGLTKKLNSIYPESNDEFKSIYYERLDKECKTIIQMGFAGYFLIVQDFINWAKNNGVP
VGPGRGSGAGSLVAYSLGITDLDPIKYDLLFERFLNPERVSMPDFDIDFCPDNRDRVIDY
VKNKYGSDSVSQIVTFGTFGAKAVIRDVGRVLGLPYSLCDSLSKLIPFNPVDQWSLERVI
NSEPSFKSRYNQEEEVKNLVDLAMPLEGLVRNVGMHAGGVLIAPGKLTDFCPLYCQPGQE
TSIVSQFDKDDVELAGLVKFDFLGLRNLTVLDWAVRYVRSFNKDEKDFDLANLELDDKLT
YNLLCNGNTTAVFQLESKGMKDLLKRLKPNTFEDIIAVLALYRPGPLESGMVNDFVNRKH
GLSTINYFHPILESILKSTYGVIVYQEQVMLISQVVGGYSLGGADLLRRAMGKKDPEEMS
RHRVLFEKGAVNKGYSPHLAIKLFDLMEKFAGYGFNKSHSAAYALIAYQTAWLKAHYPSE
FFAASMSSDMDDTDKIKVLFNDAKNNSIDILPPDINLSNFRFEPINSHSIRYGLGAIKGV
GKSAIEEIVKIRELAGNFKSLFDFCYRASKIINRRSIESLVKSGAFDSLDPNRAFLFSSL
DIAINAADQKQRNRNQSSLFDSAEEAVVDVSIKDSVINWDLHKKLIEEKSALGYYFSDHL
FNCWGKEIRRAMPKKLIDVEPHAKAQFICGVLVSIRSVITRRGKIVIALLDDATKQLEVA
IYAEIYSEYRDFLKEDNLIAIKGIVSKDDYSGNIRIVAEKVLDLQAIRILMAKSLVLHIK
DNVIDTASIRSIIEKHNSYINNKESLVSIFVFYENNVKKFSCKVKLGDRWMVVITDNLLS
ELKNLIGSDFIDIVY
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaaactctaaaaaatcagtttcttttgttcatcttcgtgttcattcggaatat
tctattgtagatggtttaataaaaattaatgatctagtagatggagttattaaattaaag
caacctgctgtggctttaacggatctgtcaaatctttttggtgccttaaaattttataag
tattctcgatcgagaggtataaagccagttatcggatgtgatgtatggttatctaacgat
gaagataaaagtaaaccgcataggattctgattcttgttcgtaataatgctggatattta
aatttatgcaatcttattacaaaatcttatttaacaaatcagacagatggtagagtagaa
attcgtaaagaatggctggtatctcaagaaggtttgataattttatcaggtggtattcat
ggagatgttggtcatgctttgaggagcggaagaaaagatttagctttatctttgataaaa
cagtggaaatttatgtttcctgactcatattatattgagattcaaagatctggattaagt
gaagaggaagagtatatacaattagttgtaccaatttcttcggatgaaaatataccgata
gtagccactcatcctgtcgagttcttagaaaagagtcattttaaatctcatgaagtaaga
gtttgcattgctgatggcaaacatctaacagatgttaataagaatcatttttttacagaa
aagcaatatttattaagttctgaagaaatgattgatttgtttgctgatattccatcagca
ttatctaattctattgaaatagctaaacgttgtaatatcaatcttcagataggtaagcca
atgcttccaaattttgaagttagagatgatatttctttagagttttatttaaaacaatta
tctagtagcggtctaacaaagaaactaaatagtatttatccagagtctaacgatgagttt
aagagtatatattacgagcgtttggacaaagaatgtaaaactattatacaaatgggattt
gctggatatttcttaatcgttcaggattttattaattgggctaaaaataatggtgttcca
gtaggtcccggtcgtggatctggagctggttctctagttgcttactcacttggaattaca
gatttagatcctataaaatatgatttattgtttgagagattcttaaatcctgaacgtgtt
tctatgccagattttgatattgatttttgtcctgataatagagatagagttatagattat
gttaagaataaatatggtagtgattctgttagtcagatagtaacttttggaacttttggg
gcaaaggctgttattcgtgatgtgggaagagtattaggtttgccttattctttatgtgat
agtttatctaaattgatcccttttaatccagtagatcagtggtcattagaaagagttata
aattcagagccatcatttaaaagtcgttataatcaagaagaggaagttaaaaatttagtg
gatttagctatgcctttagaaggtttagttagaaatgttggtatgcatgcaggtggtgtt
ttaattgcgcctggtaagctaacagatttttgtcctttatattgtcaaccagggcaagaa
actagtatagtctctcaatttgataaagatgatgttgaattagctggattggtaaaattt
gattttctaggtttaagaaatcttactgtcttagattgggctgttcgttatgttaggagt
tttaataaagatgaaaaagattttgatttagctaatttagaacttgatgataaacttact
tataaccttctttgcaatggcaataccacggctgttttccaattagaatctaaaggcatg
aaggatttattgaagagattaaaaccaaatacttttgaagatataatagctgttttagct
ttgtatagaccaggacctttagaatctggaatggtcaatgattttgtaaatagaaaacat
ggattgtcgacgataaattattttcatcctatattggaaagtattctaaaaagtacgtat
ggagtgatagtttatcaagaacaggtcatgttaatttctcaagttgttggtggatattct
ttaggaggggctgatttattacgtagagcaatgggtaaaaaggaccctgaggaaatgtct
aggcaccgtgttttgttcgaaaaaggagctgttaataaaggttatagtccacatcttgca
attaaattatttgatttaatggaaaaatttgcaggttatggttttaataaatctcattca
gctgcttatgccttgatagcatatcagacagcttggttaaaggctcattatccttctgaa
ttttttgcggcctctatgtcatctgatatggatgatacggacaagataaaagttttattt
aatgatgctaaaaacaactctattgatattttgcctcctgatattaatttgtctaatttt
agatttgagccaattaatagtcatagcataagatacggtttaggagctattaagggtgtt
ggcaagagtgctattgaggaaatagttaagataagagaattagctggaaactttaaaagt
ttatttgatttttgttatagggcgtctaaaattattaatcgtcggtctatagaatcactg
gttaaatctggagcttttgattctttagatcccaatagagcatttttattttcttcttta
gatatagctataaatgcagcagatcaaaaacaaagaaatcgtaaccaatcttctttgttt
gattctgctgaagaagctgtcgtggatgtttctataaaggatagtgttataaattgggat
ttacataagaagcttatagaagagaaatctgcattaggttattattttagtgatcactta
tttaattgttggggcaaggaaataagaagagcaatgcctaaaaaactaattgatgtagaa
cctcatgctaaggcacaatttatttgtggtgttttagttagcattcgaagtgttataacg
cgtagaggtaaaatagtaattgctttattagatgatgctactaaacaattggaggttgct
atttatgctgaaatttattctgaatatcgtgattttttaaaagaagataatcttatagct
attaaaggaatagttagtaaagatgattattctggaaatattagaatagttgcagaaaag
gtgcttgatttacaagcgattagaattcttatggctaaatctttagttctgcatattaaa
gataatgtaatagatactgctagtattagatctattatagaaaagcacaattcatatatt
aataataaagaatctttagtatctatattcgtgttctatgagaacaatgtaaaaaaattc
tcttgtaaagttaaattaggggatcgctggatggttgttattacagataatttattatct
gaactgaaaaatcttataggttctgattttatagatattgtttattaa
DBGET
integrated database retrieval system
