Candidatus Kinetoplastidibacterium desouzai: CDSE_0674
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Entry
CDSE_0674 CDS
T02465
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kde
Candidatus Kinetoplastidibacterium desouzai
Pathway
kde03030
DNA replication
kde03410
Base excision repair
kde03420
Nucleotide excision repair
kde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDSE_0674
03410 Base excision repair
CDSE_0674
03420 Nucleotide excision repair
CDSE_0674
03440 Homologous recombination
CDSE_0674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kde03032
]
CDSE_0674
03400 DNA repair and recombination proteins [BR:
kde03400
]
CDSE_0674
Enzymes [BR:
kde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDSE_0674
DNA replication proteins [BR:
kde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CDSE_0674
DNA repair and recombination proteins [BR:
kde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CDSE_0674
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDSE_0674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AGF46958
UniProt:
M1L2I2
LinkDB
All DBs
Position
complement(454562..457261)
Genome browser
AA seq
899 aa
AA seq
DB search
MMDESLLLVDGSSYLYRAFYALPDLRNSKGEPTGAIYGVISMLRKLIMEYDPKYFVCVFD
APGKTFRNDISSDYKSNRPSMPEELVFQIDKIHQIINALGLFVLSVNGVEADDVIGTIAK
TASKLDNLQVIISTGDKDLAQLVNSKIRIINTMNGEILDNAGVLKKFGVNPALIVDYLML
VGDSVDNIPGVPKIGPKTAIKLLNEFGNIDNIILSADKIKGIVGANLIKFIPNFTITKEL
LTIKCDCILSSYFEKIEDFSRKPLNINLLKDLYLNLGFSSWLNDLNKIDIKPQTKMVDKE
LNLCLNFCLVNNANSFKDFFMKLEKSELTIIDTYIIKSIFLSSIRLMALSFLIDDITYYI
PFYNLELNSITRVEILSILKPWLENNNKFKILYDAKTSLHVFSILNIDLNGIKDDVMLEA
YVLDSHNNLDLYKLVDKFLCCDYLSHDDVFGRGQKTKNIESISNEIISKYFSQRINFIKK
LHFLLRPLLAKEINLEYIYDLEKVISRNLKLIEANGVKIDKSDLENQSSFLEGKILELER
EIYILAETEFNINSPKQLGDVLFKLMNLPIIRKTSSGLPSTDESVLSKLSQKYKLPKLVL
DYRALSKLKSTYTDKLPRMVDPKTNRVHTTYSQVGVITGRLSSFDPNLQNIPVRTEIGRL
IRKAFIPERDCLFVSADYSQIELRIMAHFSQDDNLQTSFKNGIDVHLSTASEIFGLPIDI
ISDDQRRTAKMINFGLIYGMGVFGLASNLNIDNLSAQNYINKYFARYPGVLNYINSVKSN
VRELGYVETIFGRRLYLPTASKKSFNKQAIDRLAINAPIQGTAADLIKKAMVSVQEWLNF
KNLKSKIVMQVHDELILEVPQVELTIIIDNISNLMCNVIDLNIPLVVDIGVGNNWSEAH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaatcattattattagtagatggctctagttatttgtatcgtgctttttat
gccttaccagatcttcgtaattcaaaaggtgagcctactggggctatatatggtgtaata
agcatgttaagaaagcttataatggaatatgatcctaaatactttgtttgtgtttttgat
gctccaggtaagacttttagaaatgacataagtagcgattataaatctaatcgtccatca
atgcctgaagaattagtattccagatagataaaattcatcaaattattaatgctttagga
ttgtttgttttgtctgttaatggtgttgaagcagatgatgttataggaacaattgcaaaa
actgcttcgaaactagataatttgcaagttattatatctactggagataaagatttagct
cagttagttaattctaaaataagaatcattaatacaatgaatggtgagattttagataat
gctggggttttgaaaaaatttggagtaaacccagcattgattgttgattacttaatgttg
gtaggagattctgtagacaatataccaggtgttcctaaaattggtcctaagacagctatt
aaactattaaacgaatttggaaatatagataatattattttatccgcagataaaataaag
ggtattgttggtgcaaatttaataaagtttattcctaattttacaattacaaaagaatta
ttaacaataaagtgtgattgtatactgtcttcttattttgaaaaaatagaagatttcagc
agaaaacctttaaatataaatcttttaaaagatttatatttaaatttaggattttcttca
tggttaaatgatttaaataaaatagatataaagcctcaaactaagatggtagataaagaa
cttaacttatgtttgaatttttgtcttgttaataatgcaaatagtttcaaagattttttt
atgaaactagagaaatctgagttaactattatagacacttatattataaaatctattttt
ttgagttcaattcgtttaatggcattatcttttctaattgatgatattacttactatata
ccattttataatttggaattgaattctattacaagagttgaaattttatcaatattaaaa
ccatggttagaaaataataataagtttaaaattttatatgatgctaaaacaagtttacat
gttttcagtattttaaatatagatttaaatggtatcaaagacgatgttatgttggaggct
tatgtattagactcgcataataatctagatttatataaattagtagataaatttttgtgt
tgtgattatctatctcatgatgatgtttttggaagaggtcagaaaacaaaaaatattgaa
tctatttctaatgaaattataagtaaatatttttcccaaagaataaattttattaaaaag
ttacattttttattgcgtccattgttagcaaaagaaataaatttagaatacatttatgat
ttagaaaaagttatttctaggaatttaaagcttatagaagctaatggtgtaaaaatagat
aaatctgatttagaaaatcaaagttccttcttagaaggaaagattttggagttagaaaga
gaaatatacatattagcagaaactgaatttaatattaattcccctaaacaactaggggat
gttttatttaaattaatgaatttacctattattagaaaaactagtagtggattgccttct
acagatgagtcagtgcttagcaaactttctcaaaaatataaattacctaaattggttcta
gattatcgtgcgctttctaaattaaaatcaacttacactgataaattaccaagaatggtt
gatcctaaaactaatagagtacatactacttactctcaagtaggtgttattactggtaga
ttatcttcttttgatcctaatcttcaaaacattcctgttcgtactgaaattggtaggtta
attaggaaagcttttattcctgagagagattgtttatttgtctctgccgattactctcaa
atagaacttagaattatggctcatttttcacaagatgataatttacaaacttcttttaag
aatgggattgatgttcacctatctactgcatctgaaatatttggacttcctatagacatt
ataagtgacgatcaacgtagaacagcaaaaatgattaattttggattaatctacggaatg
ggagtttttggtcttgcttctaatcttaatattgataatttatcagcacaaaattatata
aataaatattttgcacgttatcctggtgtattaaattatattaattctgttaagtcgaat
gtaagagaattaggttatgtagaaactatatttggtagaaggctatatttaccaacagct
tctaaaaaatcttttaataaacaagctatagatagattggctataaatgctcctatacaa
gggacagcagctgatttaataaaaaaggctatggtttcagttcaagaatggttaaatttt
aaaaatttaaaatctaaaatcgttatgcaagttcatgatgagttgattttagaggtccct
caagtagaattaactatcattatagataatatatctaatctgatgtgtaatgttattgat
cttaacattccattagttgttgatataggtgttggtaataattggtcagaggctcactaa
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