Candidatus Kinetoplastidibacterium desouzai: CDSE_0679
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Entry
CDSE_0679 CDS
T02465
Name
(GenBank) N utilization substance protein A
KO
K02600
transcription termination/antitermination protein NusA
Organism
kde
Candidatus Kinetoplastidibacterium desouzai
Brite
KEGG Orthology (KO) [BR:
kde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kde03021
]
CDSE_0679
03009 Ribosome biogenesis [BR:
kde03009
]
CDSE_0679
Transcription machinery [BR:
kde03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CDSE_0679
Ribosome biogenesis [BR:
kde03009
]
Prokaryotic type
rRNA transcription factors
CDSE_0679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AGF46963
UniProt:
M1L2I7
LinkDB
All DBs
Position
complement(463202..464674)
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AA seq
490 aa
AA seq
DB search
MSREILMLVDALAREKNVAHEIIFGALEEALAYAIKKRFKEDIDIKVFISKETGKHEAVR
RWLVVPDEDGLQDPDKQEMLSDARETNPDIRVGDYIEESLDPEDFGRISAQVAKQAILQR
IRDAEKEQILNDFLSRGENIISGSIKRIDKGDAIVDIGRIEARLPRSEMIPRENLRMGDR
VRAMVLKVDRNVRGQQVILSRVSPHFIIYLFENEVPEIEQGLLEIKAAAHDPGIRAKIAV
VSNDKRIDPIGTCVGVRGLRVSAVRNELGGEQIDIVLWSNDPAQFVIGALAPANVESIVV
DENNHSMDVVVDDENLPKAIGVKGQNVRLASELTGWKINIMTSEESIKRQETERLRIVSY
FVKKLSINTDEANLLVDNGFSGIEEIAYVPLQELLEIKYFDEEFVNKLRSRARNALLTEA
LVQEENIESDSDLLKIDGVDQELLTKLTAHGIFTKDDLAELDSEELSEISGLSLEKSSDL
IMLARAHWFE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtgaaattcttatgttggtcgatgcattggcgcgtgaaaaaaatgttgctcac
gaaataatttttggagctttagaggaagctctcgcctatgctattaaaaaaagatttaaa
gaagatatagatattaaggtttttataagcaaggaaactggtaagcatgaagctgttcgt
cgctggctagttgtgcctgatgaggatggattgcaagatcctgataaacaagaaatgtta
tctgatgcaagagaaacaaatcctgatatacgtgttggtgattatatagaagaatcattg
gacccagaagattttggaagaataagtgctcaggttgctaaacaagctattcttcaacgt
attagagatgctgaaaaagaacaaatattaaatgatttcttgagtcgtggtgaaaatatc
atttcaggatctattaaaagaatagataagggagatgctatagtagatataggcagaata
gaagctagattacctcgatctgaaatgattcctagagagaatctcagaatgggagatagg
gtaagggctatggttcttaaagttgatcgcaatgttcgtggtcaacaagttatattgtct
agagtttctccacattttataatttatttatttgaaaatgaagttcctgaaatagaacag
ggtctattagaaattaaggcagctgctcatgaccctggtataagagctaaaatagcagta
gtgtcaaatgataaacgtatagatccaataggtacctgtgttggtgttcgtggtttaaga
gttagcgctgttcgcaatgagttagggggagaacagattgatatagttttgtggtcaaat
gatccagctcaatttgttattggggctttggctccggctaatgttgaatctatagttgtt
gatgaaaataatcattctatggatgttgttgttgatgatgaaaatttgcccaaagctatt
ggagtaaaagggcagaacgttagattggcttcagaattaactggttggaaaattaatata
atgacatctgaggaaagtattaaacgtcaagaaactgagcgtttaaggatagtttcttat
tttgtaaaaaaattgagtatcaatacagatgaagctaatttgcttgtagataatggtttt
tctggtatcgaagaaatagcttatgttcctttacaagagttattggaaattaagtatttt
gatgaagaatttgtaaataaactaagatcacgtgctagaaatgctttgttaacagaagct
cttgttcaagaagaaaatattgagtcagactctgatttattgaaaatcgatggagttgat
caggagttgttaacaaaattaacagcacatggtatttttacaaaggatgatttagctgaa
ttagattctgaagaattatccgaaatatcaggattaagtttagagaagtctagtgattta
ataatgttagctagggctcattggtttgaatag
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