Candidatus Kinetoplastidibacterium desouzai: CDSE_0682
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Entry
CDSE_0682 CDS
T02465
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
kde
Candidatus Kinetoplastidibacterium desouzai
Brite
KEGG Orthology (KO) [BR:
kde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kde03009
]
CDSE_0682
Enzymes [BR:
kde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CDSE_0682
Ribosome biogenesis [BR:
kde03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CDSE_0682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AGF46965
UniProt:
M1M403
LinkDB
All DBs
Position
complement(465375..466901)
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AA seq
508 aa
AA seq
DB search
MTNNKNIQNSALIHNDCLEHSSESKDNLSCSRSKLRKLRTPFRRRRGDVSELSCNQDNSN
FQNNLKTGNKFLLSKQNNLEVSKIKKNNFELSFLERSDHIENRLKLSSTHNDDIFPKLHK
VLAELGVGSRREMEDLIIAGRISVNGAPAHVGQRVKPNDLIRLNGKLIRRISKNRTPRIL
VYHKPSGEIVSNKDPQGRENVFANLPKIGSGRWVSIGRLDINTEGLLIFTNSGELANYFM
HPKYGFEREYAVRIIGDLSESQKKSLIDGVNLQDGLARFESLKAIGGEGVNRWYKVVLKE
GRNREVRRMFEFLGITVSRLIRIRYDDVTLPRNLRRGKYYEFDESVVIALMMKIGFLKAN
NDIVNSNVKNNFSYNKNSCIKNTPQRSNHNMGYKNKKQNKSHDDQLIFHTSEVLTKNDNH
HYDNKKVLVDKDVNHLKNESQGNYIKNNSSNYLKLSKPKHDKFTKKTRVFYGKKNSHSFV
SNEDEQPINPSAHESNLGIIKSKKRNFH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaataataaaaatatacaaaatagtgcattgattcataatgattgtttagaacat
tcttctgagtccaaagacaatctttcttgttcacgaagtaaattacgtaaattacgcact
ccttttagacgtcgcaggggggatgttagtgaattatcatgtaatcaggataattctaat
tttcagaataatctaaaaactggaaataaatttttattatctaaacagaataatcttgag
gtttctaaaattaaaaaaaataatttcgaactttcttttttagaaagatcagatcatatt
gaaaataggttaaaactttcatcaacacataatgatgatatttttcctaaattgcataaa
gttcttgctgaactaggtgttgggtccagaagagaaatggaagatcttataatagcaggt
agaatatctgttaatggagctccagctcatgttggtcaaagagtaaaacctaatgactta
attaggttaaatggtaaattaattcgtagaattagtaaaaatagaacacctagaatctta
gtgtatcataaaccatctggagaaatagtaagcaataaagaccctcaaggtagagagaat
gtatttgccaatttacccaaaataggttcaggcagatgggtgtccataggtagactagat
ataaatacagagggattgctgattttcactaattctggcgaactagctaattattttatg
catccaaagtatgggtttgaacgtgaatatgctgttagaattattggtgatcttagcgag
tctcaaaaaaaatctcttattgatggtgttaatttacaggatgggcttgctcgttttgaa
tctttaaaagcaataggtggagaaggtgtaaatcgttggtataaagttgttttaaaagaa
ggaagaaacagagaagttagaagaatgtttgaatttttaggaataacagttagtagactt
ataagaataagatatgatgatgttacactaccacgtaatttacgtcgtggtaagtattat
gaattcgatgaatctgtagtaattgctcttatgatgaagattggttttttaaaagccaac
aatgatattgtcaatagtaatgttaaaaataatttttcttataataagaattcttgtata
aaaaacactcctcaacgttctaatcataacatgggatataaaaacaagaaacaaaataaa
agccatgatgatcagttaatttttcatacttcagaagttttaactaagaatgataatcat
cattatgataataagaaagttcttgtagataaagatgttaatcatttaaaaaatgaaagt
cagggaaattatattaaaaacaattctagtaattatttaaaattatctaaacccaaacat
gataaattcacaaaaaaaactagagtcttttatggtaaaaagaacagtcactcttttgta
tccaatgaagatgaacagcctattaatccaagtgctcatgaatctaatttaggaattata
aaaagtaagaagagaaattttcactga
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