Candidatus Kinetoplastidibacterium desouzai: CDSE_0706
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Entry
CDSE_0706 CDS
T02465
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
kde
Candidatus Kinetoplastidibacterium desouzai
Brite
KEGG Orthology (KO) [BR:
kde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kde03009
]
CDSE_0706
Enzymes [BR:
kde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CDSE_0706
Ribosome biogenesis [BR:
kde03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CDSE_0706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AGF46984
UniProt:
M1LUJ6
LinkDB
All DBs
Position
complement(487426..488346)
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AA seq
306 aa
AA seq
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MNPKKIIVPEGFSGRVDKTLAILMPDYSREVIKKWIIDNNVLVNGCYIKNRHNVKYGDVI
TVYEQPLPESLSFTAEDVAFEVLEENSDWLIVNKPAGLVTHPGSGNWSGTLLNGLLYRYP
ELFIVPRAGIVHRLDKNTSGIMIVARTLKSQIYLVRQLQLRFISREYIAIVQGSLLKEGT
INKTIGRDINNPIKMSAANKVISPKEAVTHFRSIVHGLTPCQRNVTKIKCILDTGRTHQI
RVHLSSIGHPLLGDSVYNGQFLSICDRPMLHSEILSFVNEKGNKYTFSSPIPSDMHKVLD
KIKWIA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctaaaaaaattattgttcctgagggttttagtggtagggtagataaaactctt
gctattttaatgccagattattctagagaggtaataaaaaaatggattatagataataat
gttcttgttaatggttgttatataaagaatcgacataatgttaaatatggcgatgtaatt
actgtttatgaacaacccttaccagaatcattatcttttactgccgaagatgttgctttt
gaagtcctagaggaaaatagtgattggcttatagtgaataagcctgctggtttagtaact
caccctggatcaggcaattggagtggtactcttttaaatggtcttttatatagatatcct
gaactttttatagttccaagagcaggtatagtacatagattagataagaatacttctggt
attatgattgttgctcgtacattaaaatcacaaatttatttagtaagacaattacagctt
agatttatatctagagaatatatagctatagttcaaggaagtttgctaaaagaaggaact
attaataaaacaataggtagagatataaataatcctataaaaatgagcgcagcaaataaa
gttatatcacctaaagaagctgtaactcattttagatctattgtacatggtttaactcct
tgtcaacgtaatgttaccaaaataaagtgtattttagatactggtcgcactcatcaaatc
agagtgcatctttctagtataggtcatccattattaggagattcagtttacaatggtcaa
tttttatctatttgtgatcgaccaatgcttcattcagaaattctaagttttgttaatgaa
aaaggtaataaatatactttttcaagtcctataccatcagatatgcataaggtattagat
aaaataaaatggattgcttaa
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