Candidatus Kinetoplastidibacterium desouzai: CDSE_0735
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Entry
CDSE_0735 CDS
T02465
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
kde
Candidatus Kinetoplastidibacterium desouzai
Pathway
kde03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
kde00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CDSE_0735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kde03019
]
CDSE_0735
03009 Ribosome biogenesis [BR:
kde03009
]
CDSE_0735
03036 Chromosome and associated proteins [BR:
kde03036
]
CDSE_0735
Enzymes [BR:
kde01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CDSE_0735
Messenger RNA biogenesis [BR:
kde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CDSE_0735
Ribosome biogenesis [BR:
kde03009
]
Eukaryotic type
90S particles
RNase
CDSE_0735
Prokaryotic type
rRNA processing factors
CDSE_0735
Chromosome and associated proteins [BR:
kde03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CDSE_0735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
HGL2_5th
Motif
Other DBs
NCBI-ProteinID:
AGF47005
UniProt:
M1M444
LinkDB
All DBs
Position
complement(514670..515362)
Genome browser
AA seq
230 aa
AA seq
DB search
MSFFKLENSLKYSFNNISLLELALTHRSYSANHNERLEFLGDSILNSSITIILFERFSHI
DEGGLSRLRASLVQQNSLAKIAIKLDISRYLRLGDGEIKSGGSNRPSILADCIEAIFGAI
FQDSGFDVCKNIIDYHYSSLIDNLDLGTMGKDSKSLLQEFLQSKHMCLPSYIIVRTNGLA
HSQTFEIDCCIPDLNIKTKSFGETRRSAEQSAAKKALELLFKLDFTNLKK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttttcaagctagaaaatagtttaaaatattcttttaataatatctctttattg
gaattagcgctaactcatcgtagttatagcgccaatcataatgagaggttagaatttctc
ggtgattcaattctaaattcttcgataacgatcatattgtttgaaagattttctcatata
gatgaaggaggtctttctagattaagagcttctttagtacagcaaaattctttagcaaaa
attgctattaaattagatatatcaagatatttaagattaggagatggtgaaataaaaagt
ggtggttctaaccgtccttctattttagcagattgtattgaagcaatatttggtgccatt
ttccaagattctggttttgatgtttgcaagaatataattgattaccattattctagttta
atagataatttagatttaggtactatgggaaaggattctaaaagtttattgcaagaattc
ttgcaatctaaacacatgtgtcttccttcgtatataattgtgcgcactaatggtcttgct
catagccaaacttttgaaatagattgttgtataccagatttaaatataaaaaccaaatct
tttggggaaacaagacgttctgctgagcaatcagcagcaaagaaggctttagaactactt
tttaaattagattttactaatttaaaaaaataa
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