Candidatus Kinetoplastidibacterium desouzai: CDSE_0799
Help
Entry
CDSE_0799 CDS
T02465
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kde
Candidatus Kinetoplastidibacterium desouzai
Pathway
kde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDSE_0799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kde03019
]
CDSE_0799
03016 Transfer RNA biogenesis [BR:
kde03016
]
CDSE_0799
Enzymes [BR:
kde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CDSE_0799
Messenger RNA biogenesis [BR:
kde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDSE_0799
Transfer RNA biogenesis [BR:
kde03016
]
Prokaryotic type
tRNA degradation factors
CDSE_0799
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
OB_PDCD11
KH_Vigilin
KH_KhpA-B
KH_SLS1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AGF47057
UniProt:
M1LMV7
LinkDB
All DBs
Position
complement(572516..574615)
Genome browser
AA seq
699 aa
AA seq
DB search
MFKKVIKSFKYGLHDVVLETGEIARQASGAVLASMGDTVVLATVVGNKETKSGQGFFPLT
VDYIEKTYSAGRIPGGFFKREGKSSEKEILTSRLIDRPLRPLFPEGFYNEVQIVVHVLSV
DPEIDPDIISMIGSSAALAISGIPFKGPIGAIRVGYLEEEFIVNPTKNQLSHSDLDLVLA
GTSDAVLMVESTAKELSESLMLEAIAFGHDQMQVVVDNICELVKEAGKPEWDWEPNCHDS
NLVNLISDNYYSEISSAYNIKEKQKRSTKLKEIKIRIKEFVCSKVIENNEIISDCVLDDI
IFNIESKVVRGKILSGEPRIDGRNTRTVRPISIRLGVLPRAHGSALFTRGETQALVVVTL
GTKHDEQIIDSLSGEYRDKFIFHYNMPPFATGEVGRIGVPKRREIGHGYLARRSLTPMLP
DSKDFQYTMRLVSEITESNGSSSMASVCGGSLAMMDAGVPIGKHVAGVAMGLILEDDKFS
ILTDILGDEDHLGDMDFKVAGTVDGITALQMDIKIQGITKDIMDVALSQAKEGRLYILDK
MQNSIDSSRLEMSSYSPKMLTLKINPDKIRDVIGKGGATIRSITEETATQIDISEDGTVV
ISGVDKDNVQEAQRKVVELTTDVEVGGVYEGKILRILDFGAIVQLFPGRDGLLHISEISS
TRIQNINDVLSIGQKIKVKVIESDDKGRLRLSAKVLKET
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaagaaagtaattaaatcatttaaatatggtttgcatgatgtagttttagagaca
ggcgagattgctcgtcaggcatcgggagcagttcttgcttctatgggtgatacagttgtt
ttggctacagttgtaggaaataaagaaactaagagtggccaaggttttttccctttaact
gtagattatattgaaaaaacttattcagctggaaggattccaggaggattttttaaaaga
gaaggaaaatcttctgaaaaagaaatattaacttctagattaatagatagacctttaaga
cctcttttcccagaaggtttttataatgaagttcagatagtcgttcatgtgttatcagta
gatcctgaaattgatcctgatattatttctatgataggatcttcggcggctttagctatt
tcaggaataccttttaaaggcccaattggagcaataagagtaggttatttagaagaggaa
ttcatagtaaatcctacaaaaaatcaattatctcattctgatttagatcttgtattagca
ggaacatcagatgctgttttaatggttgaatctactgctaaagaactatcagaatcttta
atgctagaagctattgcgtttgggcacgatcagatgcaagttgttgttgataatatttgt
gagttagttaaagaagcaggtaaaccagaatgggattgggagcctaattgtcatgatagt
aatttggtaaatttaatatcagataattactactctgagatatcttcagcttataatatt
aaagagaaacaaaagcgctcaacaaaactgaaagaaataaaaataagaattaaggagttt
gtttgcagtaaggtgatagagaacaatgaaattatttcagattgtgtacttgatgatatt
atttttaatatagaatctaaggtagttagagggaaaattctatctggagagccaagaata
gatggtcgtaatacaagaactgtacgtcctattagtattcgtcttggtgttttaccaaga
gctcatggtagtgctttatttactaggggtgaaacacaagctttagttgttgttacgtta
ggaacaaaacatgatgagcaaataatagattcattatctggtgagtatagagataagttt
atttttcattataatatgccgccttttgcaacaggggaagttggacgtattggtgttcct
aaaagaagagaaataggtcatggttatttggctagaaggtcattaactccgatgctacct
gattccaaagattttcaatatacaatgaggcttgtttctgaaataacagaatctaatggt
tcttcgtctatggcttctgtttgtggtggttcattagcaatgatggatgcaggtgttcct
ataggcaagcatgttgcaggtgttgctatgggattaattctagaggatgataagttttct
attttaactgatattctaggagatgaagatcatcttggagatatggattttaaggttgca
ggaacagttgatgggatcactgctttgcaaatggatattaaaatccaggggattacaaaa
gatattatggatgttgctttatctcaagcaaaagaaggacgtttatacattcttgataaa
atgcaaaattctatagattcatctcgcttggaaatgtcttcgtattctccaaaaatgtta
acattaaaaattaatcctgacaaaattagagatgtgattggtaagggtggagctacaata
cgttcaattacagaagaaacagctactcaaatagatatatcagaagatggaactgttgta
atctctggtgttgataaagacaatgtgcaagaagctcaaagaaaggtagtagagcttact
actgatgttgaggttggtggtgtttatgagggaaaaatattacgtattttagattttggt
gctattgtgcagttatttccaggtagagatggtctgcttcatatttcagaaatatctagt
actagaattcaaaatattaatgatgttctttcaatagggcaaaaaataaaagttaaagtt
atagagtctgatgataaaggaagacttagattatcagctaaagttttaaaagaaacttaa
DBGET
integrated database retrieval system
