KEGG   Candidatus Kinetoplastidibacterium desouzai: CDSE_0875
Entry
CDSE_0875         CDS       T02465                                 
Name
(GenBank) D-alanine-D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
kde  Candidatus Kinetoplastidibacterium desouzai
Pathway
kde00470  D-Amino acid metabolism
kde00550  Peptidoglycan biosynthesis
kde01100  Metabolic pathways
kde01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:kde00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CDSE_0875
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CDSE_0875
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    CDSE_0875
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:kde01011]
    CDSE_0875
Enzymes [BR:kde01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     CDSE_0875
Peptidoglycan biosynthesis and degradation proteins [BR:kde01011]
 Precursor biosynthesis
  Amino acid ligase
   CDSE_0875
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATPgrasp_ST TTL ATP-grasp CPSase_L_D2 ATP-grasp_4 ATPgrasp_YheCD RimK GARS_A
Other DBs
NCBI-ProteinID: AGF47119
UniProt: M1LV10
LinkDB
Position
complement(643612..644541)
AA seq 309 aa
MTVSFGKVGILCGGQSSEREISLLSGQNIYNALKSRGLDVYLFDTGENTVPDLVKEKFDV
VFIALHGKYGEDGSIQGVLELLNIPYTGSGHMASSIAMNKVITKKLWMQGGLPTPMFFKL
DKNNNSKCDLDILGFPLIIKPVHGGSTLGIKVANSYDDIDEAYKKAVLFDNEVFAEKYIV
GRELTVSIIENNNDIEVLPIIEIITPNHSYDYEHKYFSEETKYLCPANLSKEITNDIIKI
SKDAYKIIECRGWARIDILLDEYDKPWLLEINTSPGMTSHSLVPISAREIGVDYSDLCLK
ILSGASCKI
NT seq 930 nt   +upstreamnt  +downstreamnt
atgactgtttcttttggtaaggttggaatattgtgtggaggtcaatcttctgaaagggaa
atctctttgctatcaggtcaaaatatatataatgctttaaaaagtagaggtttggatgtt
tatttatttgatacaggagagaatactgtaccagatttagttaaagaaaaatttgatgtt
gtttttattgctttacatggtaaatatggagaggatggttctatacaaggtgttctagaa
ttgctgaatattccatatacaggaagcggccacatggcctctagtattgctatgaataaa
gtcataactaagaagttatggatgcaaggaggattgcctactcctatgttttttaaatta
gataagaataataattctaagtgtgatttagatattttgggatttcctctaattataaag
ccagtgcatggaggatcaacccttggaattaaggtagctaattcttatgatgatatagat
gaagcatataagaaggctgtgctttttgataatgaagtttttgctgagaagtatattgtt
ggtcgagaattaaccgtatctattattgaaaataataatgatattgaagttttacccata
atagaaatcataactcctaatcatagttatgattatgaacataaatatttttcggaagaa
acaaaatatttatgccctgctaatttatctaaagagataacaaatgatattattaaaata
tctaaagatgcttataagataattgaatgtagaggttgggctcgtattgatatactttta
gatgaatatgataaaccttggttattagaaattaatacatctccaggcatgacttcacac
tctttagttcctatttcagccagagaaattggggttgattattctgatttatgtttgaag
attttatcaggagcttcttgtaagatatag

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