Candidatus Kinetoplastidibacterium desouzai: CDSE_0875
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Entry
CDSE_0875 CDS
T02465
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
kde
Candidatus Kinetoplastidibacterium desouzai
Pathway
kde00470
D-Amino acid metabolism
kde00550
Peptidoglycan biosynthesis
kde01100
Metabolic pathways
kde01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
kde00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CDSE_0875
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CDSE_0875
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CDSE_0875
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kde01011
]
CDSE_0875
Enzymes [BR:
kde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CDSE_0875
Peptidoglycan biosynthesis and degradation proteins [BR:
kde01011
]
Precursor biosynthesis
Amino acid ligase
CDSE_0875
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATPgrasp_ST
TTL
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATPgrasp_YheCD
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AGF47119
UniProt:
M1LV10
LinkDB
All DBs
Position
complement(643612..644541)
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AA seq
309 aa
AA seq
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MTVSFGKVGILCGGQSSEREISLLSGQNIYNALKSRGLDVYLFDTGENTVPDLVKEKFDV
VFIALHGKYGEDGSIQGVLELLNIPYTGSGHMASSIAMNKVITKKLWMQGGLPTPMFFKL
DKNNNSKCDLDILGFPLIIKPVHGGSTLGIKVANSYDDIDEAYKKAVLFDNEVFAEKYIV
GRELTVSIIENNNDIEVLPIIEIITPNHSYDYEHKYFSEETKYLCPANLSKEITNDIIKI
SKDAYKIIECRGWARIDILLDEYDKPWLLEINTSPGMTSHSLVPISAREIGVDYSDLCLK
ILSGASCKI
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgactgtttcttttggtaaggttggaatattgtgtggaggtcaatcttctgaaagggaa
atctctttgctatcaggtcaaaatatatataatgctttaaaaagtagaggtttggatgtt
tatttatttgatacaggagagaatactgtaccagatttagttaaagaaaaatttgatgtt
gtttttattgctttacatggtaaatatggagaggatggttctatacaaggtgttctagaa
ttgctgaatattccatatacaggaagcggccacatggcctctagtattgctatgaataaa
gtcataactaagaagttatggatgcaaggaggattgcctactcctatgttttttaaatta
gataagaataataattctaagtgtgatttagatattttgggatttcctctaattataaag
ccagtgcatggaggatcaacccttggaattaaggtagctaattcttatgatgatatagat
gaagcatataagaaggctgtgctttttgataatgaagtttttgctgagaagtatattgtt
ggtcgagaattaaccgtatctattattgaaaataataatgatattgaagttttacccata
atagaaatcataactcctaatcatagttatgattatgaacataaatatttttcggaagaa
acaaaatatttatgccctgctaatttatctaaagagataacaaatgatattattaaaata
tctaaagatgcttataagataattgaatgtagaggttgggctcgtattgatatactttta
gatgaatatgataaaccttggttattagaaattaatacatctccaggcatgacttcacac
tctttagttcctatttcagccagagaaattggggttgattattctgatttatgtttgaag
attttatcaggagcttcttgtaagatatag
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