KEGG   Dokdonia sp. 4H-3-7-5: Krodi_0046
Entry
Krodi_0046        CDS       T01484                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
kdi  Dokdonia sp. 4H-3-7-5
Pathway
kdi02024  Quorum sensing
kdi03060  Protein export
kdi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:kdi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Krodi_0046
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Krodi_0046
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Krodi_0046
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:kdi02044]
    Krodi_0046
Enzymes [BR:kdi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Krodi_0046
Secretion system [BR:kdi02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Krodi_0046
  Eukaryotic Sec-SRP protein
   Krodi_0046
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin cobW CLP1_P AAA_17 APS_kinase AAA_33 KTI12 nSTAND3 AAA_18 TsaE 6PF2K ATP_bind_1 NPHP3_N NACHT AAA_31 AAA_16 FliD_C MurB_C
Other DBs
NCBI-ProteinID: AEE18037
LinkDB
Position
complement(49201..50529)
AA seq 442 aa
MFDNLSDKLDKALHVLKGHGSITEVNVAETLKEVRRALIDADVNFKTAKEFTNRVKEKAL
GSDVLTTLQPGQLMVKLVKDELTELMGGDAEGINLSGTPSIILMSGLQGSGKTTFSGKLA
NFLKTKKTKKPLLVACDVYRPAAIDQLHVVGDQIKVDVYSDRDEKNPVKIAQDGIAFAKA
NGHNVVIIDTAGRLAVDEVMMKEIADVHAAIQPQETLFVVDSMTGQDAVNTAKAFNDILN
FDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVV
SLVERAQEQFDEEEARKLQKKIAKNQFGFDDFLKQIQQVKKMGNMKDLMGMIPGAGKMLK
DVDIDDDAFKHIEAIIHSMTPGERENPTTINASRKKRIGKGSGTSVQQVNQLLKQFNQMS
KMMKMMQGGGGRKMMQMMNQMK
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgtttgataatttaagtgataagttagataaagccctacacgtactcaaaggtcacggt
agcattacggaagtaaacgttgcagagacacttaaggaagtgcgtcgtgctcttatagat
gcagatgttaactttaagactgcaaaggaatttacaaaccgtgttaaagaaaaagcttta
ggatctgatgtattaacgaccctacaaccagggcagttaatggtgaagcttgtaaaagat
gagcttacagaattaatgggaggtgatgcagaaggaattaatctttctggcactccatct
attatcttaatgtcaggtttacaaggttctggtaagacaaccttttcaggtaagcttgca
aacttccttaaaaccaagaaaacaaagaaacctttactagttgcctgtgatgtatatcgt
ccagcggctattgatcagttacacgtagtaggagatcagattaaggtagatgtatattct
gatcgtgatgagaagaatccagtaaagattgctcaagatggtatcgctttcgcgaaagca
aacggtcacaacgtagtaatcattgatacagcaggtcgtcttgctgtagatgaggtgatg
atgaaagaaattgcagacgttcatgctgcaatacaaccacaagagacactctttgtagta
gactcgatgactggtcaagatgctgtaaatacagcaaaagcctttaatgatattcttaac
tttgacggggttatccttacaaagctagatggagatacaagaggtggagcagcaatttct
attaaatctgtagtaaacaagcctattaaatttataggtacaggggagaaaatggaagcg
atagatgtattctatccttcacgtatggcagatcgaattcttggaatgggagatgttgta
tcacttgtagagagagcacaagagcagtttgatgaagaagaagctagaaagcttcaaaag
aaaattgcaaaaaaccaattcggttttgatgatttcttaaagcaaatccagcaagtaaag
aaaatgggtaacatgaaggacctaatgggaatgatcccaggtgccggaaagatgctcaaa
gatgtagacattgatgacgatgcatttaagcatatagaggcaatcattcactccatgacg
cctggtgagcgagaaaatcctactacgattaacgcaagtcgtaaaaagcgcatagggaaa
ggatctggtacctcggtacaacaagtaaatcagttactcaagcaatttaatcaaatgagt
aagatgatgaaaatgatgcaaggaggcggaggccgcaagatgatgcagatgatgaatcaa
atgaaataa

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