Dokdonia sp. 4H-3-7-5: Krodi_0056
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Entry
Krodi_0056 CDS
T01484
Name
(GenBank) hypothetical protein
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kdi03009
]
Krodi_0056
Enzymes [BR:
kdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
Krodi_0056
Ribosome biogenesis [BR:
kdi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Krodi_0056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
PrmA
FtsJ
Methyltransf_15
TRM5-TYW2_MTfase
MTS
AAA_25
UPF0020
TRM
Methyltransf_25
Methyltransf_10
Motif
Other DBs
NCBI-ProteinID:
AEE18047
UniProt:
F4AXD0
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Position
complement(60571..61779)
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AA seq
402 aa
AA seq
DB search
MIDLPQIKTKRLAVHLTTNAEKLVKQGHPWIFENSIAKLNKAGSSGDIAILFDNRSDKVF
GIGLYDPDSPIRIKVLSNVPATINEEFFKTRIKEAFSLRKQLLRTNTNSYRLIFGENDGF
PGLIADVYDDVIVVKIYSAIWFPYLEEILPELIETSKANTMVLRLSRNVAKGKSHGFTDG
QVIYGTLKKEVVRFVEHGVKFSANVIHGHKTGYFLDHRNNRKRVGDMAKGKTVLDVFSYA
GGFSVHALAGGATEVLSLDISAQALQVALDNGKLNKHAGNHKILAIDAFVGLQQLIDEGE
KYDIVVIDPPSFAKSAKEVNTARNSYARLAQLGTKLTAKKGMLVLASCSSRVEAEAFFDI
CELNIKKADRKFTVEGKTYHDSDHPISFPEGAYLKCGYYRLN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatagatttacctcaaataaagactaagaggcttgcagtacacctcactacaaatgcc
gaaaaacttgtaaaacaagggcatccgtggatttttgaaaatagtatcgcaaagcttaat
aaagctgggagttctggtgacatcgctattctttttgataatcgatctgataaagtattt
ggaataggattgtatgatccagattctcctatacgaataaaggttctcagtaatgtgccg
gcaaccataaatgaagagttttttaaaactagaataaaggaagcattctccttgagaaaa
caactattgagaacaaacaccaatagttatcgtctcatctttggcgagaatgatggtttc
ccagggctcattgcagatgtttatgacgatgtcattgtcgtaaaaatttacagcgccatt
tggtttccatatctagaagaaatattacctgagcttattgaaacctcaaaagcaaatacg
atggtattacgcttaagtcgaaacgtggccaaaggtaaatcacatgggtttacagatgga
caagtgatttatggaacgctcaaaaaagaagtagttcgttttgtggaacacggtgtgaaa
ttttcggcaaacgtgattcatgggcataaaacaggttactttctagaccaccgtaacaat
agaaaaagagtaggagacatggcaaagggtaagactgtgctagatgtctttagctatgct
ggaggattctctgtacatgcacttgcaggaggagcaacagaggtgttgagtcttgatatt
agtgctcaggcattacaggttgctctagataatggtaaactcaataagcatgctggtaat
cataaaattcttgctatagatgcctttgttggtttacagcaacttatagatgaaggtgag
aagtatgatatcgttgtgatagacccaccaagttttgcaaagagcgcaaaggaagtaaat
acggctagaaatagctatgctagacttgctcaattaggaaccaaactaacagccaaaaaa
gggatgcttgtactagcttcttgctcttctagagtagaagcagaggcattttttgatatc
tgtgaactcaatataaaaaaggcagatcgcaagtttacggttgaaggtaaaacctaccat
gatagcgatcatcctattagttttcctgaaggagcatatcttaaatgtggttattataga
ttaaattaa
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