Dokdonia sp. 4H-3-7-5: Krodi_0081
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Entry
Krodi_0081 CDS
T01484
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi03030
DNA replication
kdi03430
Mismatch repair
kdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Krodi_0081
03430 Mismatch repair
Krodi_0081
03440 Homologous recombination
Krodi_0081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kdi03032
]
Krodi_0081
03400 DNA repair and recombination proteins [BR:
kdi03400
]
Krodi_0081
Enzymes [BR:
kdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Krodi_0081
DNA replication proteins [BR:
kdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Krodi_0081
DNA repair and recombination proteins [BR:
kdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Krodi_0081
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
UPF0113
Motif
Other DBs
NCBI-ProteinID:
AEE18072
LinkDB
All DBs
Position
complement(90426..91430)
Genome browser
AA seq
334 aa
AA seq
DB search
MKHAKNIVEDIKKGIIKPIYFLSGEEPYFIDQISDYIEHNLLDEAEKGFNQVVLYGRDVT
IEDIVSNAKRYPMMAERQVVIVKEAQDLSRQIEKLADYVKNPQPTTVLVVAYKYKKLDKR
KGLAKALKEYGVHYESKKLYENQVGDWLRRVLIDEGYHIQPKAAQILVDYLGNDLGKVIN
ELNKLMLILPKGSEITPQAIEENIGISKDFNIFELRKAISEKDIVKAQRIAQYFTQNPKD
NPLVLTVSQLFSLFASILKYHGLPQKDKTTVARALGVSPFFVEEYITAGRNYPMKKVSAC
ISLIREVDVKSKGVGASAFASNDLLKELLVKIMN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcacgcaaaaaacatagttgaagacattaaaaaaggaatcataaaacccatttac
tttttaagtggggaagagccttattttatagatcaaatttcagattatatagagcataat
ctactcgatgaagctgaaaaaggcttcaatcaagtggtgctttatggtcgtgacgttacc
atagaagatattgtgagtaacgcaaagcgctatcctatgatggcagaacgccaggtggta
attgtaaaggaagcgcaagatctctcgcgccagattgagaagctagcagattatgtgaaa
aacccacaacctacaacggtgcttgtggtggcatataagtataagaagcttgacaaacgt
aaaggactcgcaaaagccctaaaggaatacggagttcattatgaaagtaagaaactttat
gaaaaccaagtaggcgactggttgcgtcgtgtgcttatagatgagggataccatatccaa
cctaaagcggcacaaattctagtagactatctagggaatgacttagggaaagtaattaat
gagctcaataagttgatgcttattcttcctaaaggaagcgagattacaccacaagccata
gaagagaatatcgggatcagtaaggacttcaatatttttgagttacgtaaagcaatctca
gagaaggatattgtgaaggcacagcggattgcacaatactttacacagaatcctaaggat
aatccgctggtcttaacagtgagccagttgtttagtttgtttgcgagtattctcaaatat
cacgggcttcctcaaaaggataagactacggtagcaagagcactgggtgtctcgcctttt
tttgtagaggaatatattactgcaggtcgcaattaccctatgaaaaaagtaagtgcttgt
atctccttaataagagaagtagatgtaaagagtaaaggggtaggagcgagtgcttttgca
agtaacgacttactaaaagagctgcttgtaaaaatcatgaattaa
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