Dokdonia sp. 4H-3-7-5: Krodi_0172
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Entry
Krodi_0172 CDS
T01484
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kdi03016
]
Krodi_0172
Enzymes [BR:
kdi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Krodi_0172
Transfer RNA biogenesis [BR:
kdi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Krodi_0172
Prokaryotic type
Krodi_0172
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
AEE18160
UniProt:
F4AXP3
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All DBs
Position
205414..206187
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AA seq
257 aa
AA seq
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MRYFIELSYFGKHYHGWQRQPNAVTVQETIEKALSMILRKPVQIMGAGRTDAGVHATQMY
AHFDWDGEQFTTQESIEKLTHKFNRLLPKDIAFKRIFQVADKAHTRFDATSRSYVYRIGK
EKNPFTSDHAPTVRNEVHIEAMNKAAAILLDYSDFECFSKSNTDVNTYLCDITRATWIET
EDEYHFHITANRFLRNMVRAIVGTLLEIGEGKRDITWMHEVITGKSRSQAGKSVPGRGLY
LTEILYPETIYKDHGRD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgcgttattttatcgagctttcttactttggaaaacactaccacggctggcagcgtcaa
cctaatgccgttaccgtgcaagaaacgatagagaaggcactatctatgattttgagaaaa
ccagtccaaatcatgggtgctggacgcactgacgctggtgtgcatgccacacagatgtat
gcacattttgattgggatggcgagcagtttactactcaagaaagcatagaaaaacttacc
cataaattcaatcgtcttttaccaaaagatatagcctttaaacgcatttttcaagtggca
gacaaagcacatacacgttttgacgccactagtaggtcttatgtgtatcgcatagggaaa
gaaaaaaacccatttacatcagatcacgccccaacagtacggaatgaagtgcatattgaa
gctatgaataaggcggcagcgatcctgcttgactatagtgattttgagtgtttttctaaa
tcaaatactgacgtgaacacctatctttgtgatattacacgtgcaacgtggatagagacc
gaggatgagtatcattttcatattacagcaaatagatttttacgtaatatggtacgagcc
attgtaggtactttactagaaataggcgaaggaaagagagacattacatggatgcacgag
gtaataactggtaaaagtagatcacaggcaggaaaatcagttcctggacgcggtttatac
ttgacagagattttatacccagaaacaatttataaagatcatggcagagactaa
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