Dokdonia sp. 4H-3-7-5: Krodi_0315
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Entry
Krodi_0315 CDS
T01484
Name
(GenBank) Heparinase II/III family protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Krodi_0315
Enzymes [BR:
kdi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
Krodi_0315
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Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Alg17C_C
Motif
Other DBs
NCBI-ProteinID:
AEE18301
UniProt:
F4AY34
LinkDB
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Position
complement(357306..359603)
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AA seq
765 aa
AA seq
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MKLISRNTALVVGITLSTLFVSCDEQGTSKDTSGATTSGANPNVVLTTTEVEDIRAKLGS
VPLFDSSLAVAKQEVDAAMEKGIQVPIPKDMAGGYTHTQHKLNYTILHKAGVIFQLTGEE
KYAQYTRDVLMKYAEMYPSLPRHPQERSYSRGKIFWQCLNDANWLVHMSQAYDAIRSWIP
EEDREILDTKLFRPFADFLSVETPQFFNRIHNHSTWGTVAVGMIGLVMDDDELVDRALYG
IKNDSISATATDNDGGLIKAEGQKTGFLANLDEPFSPDGYYTEGPYYQRYAMYPFLAFAK
ALETKKPELKIFEYNGGVLIKAVDALLNLTDQNGDFFPLNDGQKGMSYNTSSLVSAVDIA
YYYGNQDARLLSVAQQQGQVELDITGLAVAQAIEAGKAIPFTKESVLLHDGPEGNQGGVA
ILRANYSQGTMALVMKNASHGLSHGHFDKLSYSLYEDGAEVLQDYGLARFVNVEQKNGGG
YLKENTTWAKQTIAHNTVVIDETSHFKGSFKESSKHHPEIITFETNDEKLQVVSATENNA
YPGTEITRTMMMVTPEGGNKPYIIDINQINSNQAHQIDLPIYYHGQVISTSFDLQQEASL
RALGTANGYQHIWKEAMGNAKAGSSQFTWLNNNRFYSVTTLSDSKDTFILGRVGANDSSF
NLRRDPMFIHRKTDVKNAVYAQVIESHGTYNAVTEKAQDAYASVASITQEKAPEGYVAIK
ITMLSGEEQLVVVVDNAFAKAQHSITLSNQTYTWKGNYTLKQIKN
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaattagcagaaatacggctcttgtagttggtatcacactttcgactttattc
gtttcttgtgatgagcagggaactagtaaagacacatcgggcgctactacaagtggcgca
aatccaaatgtagtacttaccacaactgaggttgaagatataagagctaagttgggaagt
gttccgttgtttgatagttcgctagctgtagcaaaacaagaagtagatgcagcaatggaa
aaagggatacaagtgcctatcccaaaggacatggctggaggttatacccacacacagcat
aaattaaattataccatacttcataaggcaggggtgatttttcagctcacgggagaagag
aaatatgcacagtatacgagagatgtattaatgaaatatgcagagatgtatccttcatta
ccacgtcacccgcaagaacgatcatattctcgtgggaagatattctggcaatgtctcaat
gatgcaaactggttagtgcatatgagccaggcgtatgacgccatacgtagttggatacca
gaagaagatcgtgagattctcgatacaaagttatttcgtccatttgcagattttctgtct
gtagaaacaccacaattttttaaccgcattcataatcatagtacttggggtactgtcgct
gtaggtatgataggtttagtaatggatgatgatgagcttgtagaccgcgcattgtacggc
attaaaaacgatagtatttcggcgaccgcgacggataatgatggcggactcataaaggct
gagggtcaaaaaacagggtttctagcaaatctagatgaacctttttcgccagatggttat
tatacagaaggaccgtactatcagcgatatgcgatgtatccttttttagctttcgcgaaa
gcgttagaaactaaaaaaccggaactcaaaatatttgaatacaatggcggagttttaata
aaagcagtagatgcacttcttaacctcaccgatcaaaatggtgattttttcccactaaat
gatggtcaaaaaggaatgtcttataacacgtcatcattggtttctgcagtggatattgct
tattattatgggaatcaagacgcacgtttactatcggtagcgcagcagcaaggacaagta
gaacttgatattaccggtcttgcagtagctcaggcaattgaggcaggtaaagcaatccca
ttcacaaaagaatctgttttactacatgacggcccagaaggtaatcaaggtggtgttgct
attttaagagcaaattatagtcaaggaacgatggcactagtgatgaaaaatgctagtcat
ggtttgagtcatgggcattttgataagctctcttattctctttatgaagatggagcagag
gtattgcaagattatggactcgcacgttttgtaaatgtcgagcaaaagaatggaggtggt
tacctaaaagaaaatacgacttgggcaaagcaaactattgctcataatacagtggtgatt
gatgagacatcacactttaaaggtagttttaaggaaagttcaaaacaccacccagagatt
atcacttttgaaactaatgatgaaaaactacaagtagtaagcgccacagaaaacaacgct
taccctggaacggagattacacgcactatgatgatggtaacaccagaaggtggtaacaag
ccatatataatagatattaatcaaataaacagcaatcaagcgcatcagatagacttacca
atctattatcatgggcaggtcatctcaactagttttgatttacagcaggaagcatcatta
cgcgcattaggaacggcaaacggatatcaacacatatggaaagaggccatgggtaatgca
aaggctggaagtagtcaatttacttggcttaataataacagattctacagtgttactaca
ctttcagatagtaaggatacatttattttaggtcgtgtgggagcaaatgattcatcgttt
aacctacgcagagatcctatgtttatacatcgaaagacagatgttaaaaacgcagtgtac
gctcaggtgatagaatcccatggtacctataatgcggttacagaaaaagcgcaggatgca
tatgcatctgtggcatctataactcaagaaaaagcaccagaaggatatgtggctataaaa
atcactatgctatctggggaggagcaacttgtggtggtggtagataacgctttcgcgaaa
gcgcaacattcaataaccctatcaaatcaaacatacacctggaaaggtaattacacttta
aaacaaattaaaaactaa
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