Dokdonia sp. 4H-3-7-5: Krodi_0351
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Entry
Krodi_0351 CDS
T01484
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kdi03032
]
Krodi_0351
03400 DNA repair and recombination proteins [BR:
kdi03400
]
Krodi_0351
Enzymes [BR:
kdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Krodi_0351
DNA replication proteins [BR:
kdi03032
]
Prokaryotic type
DNA Topoisomerases
Krodi_0351
DNA repair and recombination proteins [BR:
kdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Krodi_0351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
ParB
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
AEE18337
UniProt:
F4AY70
LinkDB
All DBs
Position
415022..416101
Genome browser
AA seq
359 aa
AA seq
DB search
MTLTANQIENILRNPEETAAAANLIYVSDADLNIRRKKKKKNFHYYFNDKPLEDEKELDR
INNLVIPPNWEKVRIAYPPNGHLQVVGRDAKNRKVYRYHDLWSKIRNQTKFYKLANFGNA
LPSIRERIDEDLDAPEMSKRKVLALVLRLMEETHIRIGNDYYAKRNKTYGLSTLRTRHVT
TTKEKIRFEFVGKKGKKHNITLRNKKLAKLVNRCEEIPGWELFQFYDANGEKHRVDSSMV
NNYIHELSGDLFSAKDFRTWGATKTFFETVHDLGYTEDAKENKANILTAFDAAAKALGNT
RNVCRKYYVHPQIVDAYESGSIVAEFKKVDAHQGARPFFTETEEVLLQMISKFELDFSK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacactcaccgccaaccaaattgaaaacatcctgagaaacccagaggaaactgcagcc
gcagcaaatctcatttacgtctctgatgcagacctcaacataagaaggaaaaagaagaag
aaaaactttcattattactttaatgataaacctcttgaggacgagaaggaactagatcgc
atcaataatctcgtaataccgcctaactgggagaaagtgcgcattgcatatcctcctaac
ggacatttacaagtggtaggacgagatgctaaaaacagaaaagtataccgatatcacgat
ctgtggtcaaaaattagaaaccaaactaagttttataaactagccaattttggaaacgca
ctgcctagcatacgcgagcgcatagatgaggatcttgatgctccagagatgtcaaaacgc
aaggtacttgcacttgtcctcaggcttatggaagaaacccacatacgcataggtaacgac
tactacgcaaagcgcaataaaacctacggcctctctaccttacgcaccagacacgtgaca
accaccaaggaaaaaatccgctttgagtttgtgggtaaaaaaggtaaaaagcacaacatc
accctacgcaataagaaactcgcaaagcttgtaaaccgttgcgaagaaatacctggctgg
gagttatttcaattttatgatgcaaatggcgaaaagcaccgcgtagatagctcgatggta
aacaattatatacacgagctaagcggagacttgttttcggcaaaggattttagaacttgg
ggagctacaaaaactttttttgaaaccgtgcacgacctaggctacacagaagacgcaaaa
gaaaacaaagcaaacatactcaccgcttttgatgccgctgcaaaagctctaggtaacaca
cgcaacgtatgtcgcaagtactatgtgcatcctcaaatagtagatgcctatgagtctgga
tctatcgtcgctgagtttaaaaaggtagatgctcatcaaggagcaagaccattttttaca
gaaactgaggaagtcttactgcaaatgatttcaaagtttgaattagattttagtaagtga
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