Dokdonia sp. 4H-3-7-5: Krodi_0421
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Entry
Krodi_0421 CDS
T01484
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kdi03400
]
Krodi_0421
DNA repair and recombination proteins [BR:
kdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Krodi_0421
TLS (translesion DNA synthesis) factors
Other SOS response factors
Krodi_0421
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
AAA_21
AAA_22
TBCA_PH
NPV_P10
RsgA_GTPase
ABC_tran
DUF848
Motif
Other DBs
NCBI-ProteinID:
AEE18407
LinkDB
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Position
complement(485632..487284)
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AA seq
550 aa
AA seq
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MLTSLSIKNYALIQSVQLRFDKGFTVITGETGAGKSILLGALGLITGKRADMSSAGDATQ
KCIVEGVFHIDGYQLHPFFKDHDLDYENATIVRREILPSGKSRAFINDTPVTLAQLTILG
ARLVDIHSQNKTLQVVENDFQFEMIDTFSDNLKLLGKYKESFKAWKLLQSELKELLERKK
QAQLEYDYQSFLFTELDEASLKEGEYESLEEELNTLSNADEIMQQLAIAVQNISLDENGA
IDQLTAARAALSRLNSYGTQYTAIYEQLNSALLELEDIGASLSEMSDAVDADPLALERLN
NRMQLLHSLLKKHQVATVEELIAIRNNLDNGLQDIAGVDDKIQALEDKIKTQHNKASTLA
AKLHKERTTAAPHLKSLVEKLLIELGMPNAQFQVSLAMQEDLHASGNDVLEFLFSANKGS
ELKPLGKGASGGELSRVMLALKSVLSKHKQLPTLIFDEIDTGVSGDIAVKMGGILKKMGR
TMQLISITHLPQIAGQGASHFKVYKKDTEERTQTFIEQLDEDARIVEIAAMLGGNQQSQA
AIDHAKNLLN
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
ttgcttacatcattatctataaaaaattatgcactcatccagtctgttcaactgagattt
gataaaggttttacagttattactggtgagacaggtgcaggtaagtctatccttttagga
gcgcttggtcttattactggtaaacgggcagatatgtcaagtgctggagatgcaacacag
aagtgcattgtagaaggtgttttccatatagatggatatcaacttcatcctttttttaaa
gaccatgatcttgattacgaaaatgcgacaatcgtaagaagggagattctgccttctgga
aaaagtagggcatttataaatgacactcctgtaacactagcacagcttactattttagga
gcgagactagtagacatacatagccagaataaaactttacaggtagtagaaaatgatttt
caatttgagatgattgatacattttcagacaatctcaaattacttgggaaatacaaagag
tcttttaaagcttggaagcttttgcagagcgaactaaaagaattactagaaagaaaaaaa
caagcgcagcttgaatatgattatcagtcttttctttttacggagctagatgaggcttct
ttaaaagaaggtgagtatgagtctttagaagaagagcttaatacgttgagtaatgcagat
gagattatgcaacagcttgctatagctgttcaaaatatttctctagatgaaaacggtgct
atagatcagctcacagcggctagagctgcgttatcaagattaaatagctacggtactcag
tatacggcaatttatgagcagcttaatagtgcgcttttagaactagaagatataggagca
tcattgagtgagatgtctgacgcggtagatgcagatcctcttgcacttgagcgacttaat
aacagaatgcaattactgcattctttactcaaaaagcatcaagtagcgacagtagaagaa
ctaatagctattagaaataatcttgataatggtttacaagatattgcaggagttgatgat
aagattcaagcactagaagataaaattaaaacgcaacataacaaagcaagtacactagca
gcaaagctgcataaagagcgcacaacggcagcgccgcatttaaagtcgctggttgagaaa
ttactgatagagttaggaatgcctaatgcacaatttcaagtgtctctagctatgcaagaa
gatcttcatgcttcaggtaatgatgtgttggagtttttattctcggcaaataaagggagt
gagctcaaaccattaggaaaaggtgcttctggaggagaactttcaagagttatgctcgca
ctcaagtcggtactaagtaagcacaagcaattgcctacgcttatttttgatgaaatagat
actggagtaagtggagatattgcagtaaaaatgggtggtatccttaaaaaaatgggtcgt
actatgcagcttataagcatcacacacttaccgcaaatagcaggtcaaggcgcttctcat
tttaaagtgtacaagaaagatacagaggagcgtacacaaacctttatcgagcagctagat
gaagatgctcgtattgttgagatagcggcaatgttaggtggtaaccagcaaagtcaagca
gcaatagaccacgcaaaaaatctacttaattag
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