Dokdonia sp. 4H-3-7-5: Krodi_0489
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Entry
Krodi_0489 CDS
T01484
Name
(GenBank) radical SAM enzyme, Cfr family
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kdi03009
]
Krodi_0489
Enzymes [BR:
kdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
Krodi_0489
Ribosome biogenesis [BR:
kdi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Krodi_0489
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AEE18475
UniProt:
F4AYK8
LinkDB
All DBs
Position
complement(557484..558524)
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AA seq
346 aa
AA seq
DB search
MKTDKRDIRKLSKEELRDFFVSQGDKPFRGNQVYEWLWQKGAHDFIDMTNLSKDTRILLD
ENFVINHIRVDQMQRSSDGTIKNGVELHDGLMVESVLIPTKNRTTACVSSQVGCSLNCKF
CATARLKRMRNLNPDEIVDQVVVIDRQSRLYHDKPLSNIVFMGMGEPLMNYNNVIKAIDK
ITDPEGLGMSPKRITVSTSGVPKIIKKMADDDVKFNLAVSLHSALDNVRTEIMPFNEQMP
LADLKEALIYWYEKTGKRITYEYVVWDGINDRHIDIMALLDFCKAVPSKVNIIEYNPIDD
GQFQQANPEAIDRYVSVLEANGVTVTVRRSRGKDIDAACGQLANKQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacagataagagagacatacgtaaattaagtaaggaagaactcagagattttttt
gtatctcaaggagataaacccttccgcggaaatcaggtatatgaatggctgtggcaaaag
ggcgcacacgactttatagatatgacaaacttgtctaaggatactcgtatacttctagat
gagaacttcgtgattaatcacatacgcgtagatcaaatgcagcggagtagtgatggtact
ataaaaaatggtgttgagctacatgacggtcttatggtcgagtctgtattgattccaaca
aaaaatagaacgaccgcttgtgtttcatcacaagtaggctgcagtcttaactgtaagttt
tgtgctaccgcacgtttaaagcgtatgcgtaatctcaatccagatgagattgtagatcaa
gttgttgtgatagatagacaaagtaggctatatcacgataagccgttgtctaacattgtc
tttatgggaatgggagagcctttaatgaactataataatgtcattaaagcaatagacaaa
atcacagatccagaaggattagggatgtctcctaagcgtattaccgtatctacctctgga
gtgcctaagattattaagaaaatggcagatgatgacgtaaagtttaatcttgccgtttca
ttacactctgcacttgataatgtgcgtacagagattatgccttttaatgagcaaatgcca
cttgcagatcttaaagaggcgcttatttattggtatgaaaaaacaggaaaacgtattaca
tacgaatacgtagtgtgggatggtataaatgatcgccacattgatattatggcactatta
gacttctgtaaagctgtacctagcaaagtaaatatcattgagtataaccctattgatgat
ggtcagttccagcaagcaaatcctgaagcaatagaccgttatgtgtcagttcttgaggca
aatggtgtgacagtaaccgtgcgtagatcaagaggtaaagacatcgatgcagcctgcgga
caactagctaataagcaatag
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