Dokdonia sp. 4H-3-7-5: Krodi_0581
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Entry
Krodi_0581 CDS
T01484
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi00300
Lysine biosynthesis
kdi00550
Peptidoglycan biosynthesis
kdi01100
Metabolic pathways
kdi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Krodi_0581
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Krodi_0581
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Krodi_0581
Enzymes [BR:
kdi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Krodi_0581
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LcnD_C
Motif
Other DBs
NCBI-ProteinID:
AEE18566
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Position
662360..663634
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AA seq
424 aa
AA seq
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MTIAELHFHFLNSNGVCTDTRSLQKNQIYISLKGDNFNGNKFAKQALKDGARLAVIDEKE
YEDDYTVLVDDVLKTLQQLANYHRNYLNLPIIGLTGSNGKTTTKELINAVLSEKYVTVAT
KGNLNNHIGVPLTLLSMDSTTEIGIVEMGANHQGEIAMLCEIAQPNFGYITNFGKAHLEG
FGGFEGVIKGKSELYNYLRDNEEMAFINDTDKLQVEKATGITLQTFGSTESKYPISLVDG
SESLKLSFKNTTINSQLIGIYNYSNIAVAIAMGTYFDVSIDQIKSGIEEYIPANNRSQII
KKDSYRIILDAYNANPTSMAAALENLKATNTTTIAFIGNMFEVGVTSKAEHQAMLDLAHH
LSIDQVYAIGPDFCTSVPQVNQEVYEDYNAFAKAYSSKIPNGATVLIKGSRGMKMERILN
LLEN
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgcagagctacacttccattttttaaacagtaacggagtttgtactgacaca
agatctctacaaaaaaatcagatttacatttcccttaaaggagataactttaatggtaat
aagtttgcaaaacaagctcttaaagatggcgctaggctcgcagtgattgatgaaaaagaa
tatgaagatgattatactgtgctggtagatgacgttcttaaaacattgcaacaactagca
aactaccaccgcaattatcttaacctacctataataggtcttactggaagcaatggaaaa
accactacaaaagagcttataaacgcagtgctttccgagaagtacgtaaccgtagctact
aaaggaaatcttaacaatcacataggagtaccactcacactcttatctatggacagcact
acagagataggcattgtagaaatgggtgcaaaccatcaaggagaaatcgcaatgttatgt
gagattgcccaacctaactttggatatattacaaactttggaaaagcacacctagaaggt
tttggaggatttgaaggtgttataaaaggcaaaagtgaactttataattatcttagagat
aatgaagaaatggcttttataaacgacacagacaagctacaagtggaaaaagctactggc
attactttacaaacatttggctctacagaaagtaaataccctatcagcttagtagatgga
tctgagagtcttaaactatcttttaaaaacaccactattaatagccaactaatagggatc
tataattattcaaatattgctgtagctattgcgatgggcacttattttgatgtgtctatt
gaccaaattaaatctggaattgaagaatacatacctgcaaataatcgctctcaaatcata
aagaaagattcttatcgcataattctagatgcatataatgcaaaccctacgagcatggcg
gcagctctagaaaacttaaaggctacaaacactacgactattgcgttcataggtaatatg
tttgaagtaggtgtcacctcaaaagcagaacatcaagcgatgttagatttagcgcatcac
cttagtattgaccaagtgtatgcaataggtccagatttctgtacttcggtacctcaagtg
aaccaagaggtttatgaagattataatgctttcgcgaaagcgtattcaagcaaaattcca
aacggcgcaaccgtacttataaagggttctagaggaatgaaaatggagcgaatattaaat
ctcttagaaaattaa
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