Dokdonia sp. 4H-3-7-5: Krodi_0823
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Entry
Krodi_0823 CDS
T01484
Name
(GenBank) Sigma 54 interacting domain protein
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
kdi03110
]
Krodi_0823
Chaperones and folding catalysts [BR:
kdi03110
]
Heat shock proteins
HSP100
Krodi_0823
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
zf-C4_ClpX
ClpB_D2-small
AAA_5
AAA_22
MCM
RuvB_N
Sigma54_activat
AAA_7
Mg_chelatase
AAA_14
6PF2K
DEAD
Sigma54_activ_2
AAA_24
IstB_IS21
TsaE
ResIII
ABC_tran
Zeta_toxin
AAA_16
AAA_18
RNA_helicase
nSTAND3
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AEE18807
UniProt:
F4AZ01
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Position
complement(939864..941096)
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AA seq
410 aa
AA seq
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MAKEDLECSFCGRKKPETSLLIAGLDAHICDRCIEQAHGIVIEESKDVATNDLEGELKLR
KPQEIKEFLDGYVIGQEFTKRVMSVAVYNHYKRLLQPATDDDIEIQKSNIVMVGQTGTGK
TLIAKTIARMLNVPLAIVDATVLTEAGYVGEDVESILTRLLQAADYNLEKAQRGIVFIDE
IDKIARKSDNPSITRDVSGEGVQQALLKLLEGTVVNVPPKGGRKHPDQKFIEVDTENILF
IAGGAFDGIERHISKRLNMQAMGFVASKSEDVVEKDNMLKYIIPKDLKDFGLIPEIIGRL
PVLTHMDPLDAGTLRAILTEPKNAIIKQYKKLFSMDDIELTITDEALDYMVGKAIEYKLG
ARGLRSLCEAILTDAMFDLPSSDEKSLNVTKTYAEGKLNKSTLKKLKAAS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaagatttagaatgttcattttgtggtagaaaaaaaccggagactagctta
ctaattgctgggcttgacgcgcacatctgtgatagatgtatcgagcaagcacatggtatt
gtgatagaagagtctaaggatgttgctacaaatgatcttgaaggagagcttaagttaaga
aagccacaagaaattaaagagtttcttgatgggtacgttataggtcaagaatttacaaaa
agagtaatgtctgtagcggtatacaatcactacaaacgattattacagcctgcgacagat
gatgatatagagatccaaaagagtaacatcgtgatggtgggacaaacaggaactggtaaa
acacttatcgcaaagacaatcgctcgtatgcttaatgtgcctcttgctattgtagatgct
acagtgcttacagaagcaggttatgtaggtgaggatgttgaaagtatactaacacgtctt
ttacaagcagctgactataatcttgaaaaagcacagaggggaatcgtttttatagatgag
atagataaaattgctcgtaagagtgataacccatctattactcgtgatgtgagtggagaa
ggtgtgcaacaagcgttattaaaactattagaaggtaccgtagtaaacgtgccgcctaag
ggaggacgtaagcatccagatcaaaagtttattgaggtagatacagagaatatcttattt
atcgctggaggagcctttgatggtattgaacgccacatttctaagcgtttaaatatgcaa
gcaatggggtttgtggctagtaaaagtgaagatgtagtagagaaggataatatgcttaaa
tatattattcctaaggatcttaaagattttggtcttataccagaaatcataggtcgtctg
ccagtattgacacacatggacccattagatgctggaacgctaagagctatccttacagag
cctaaaaatgctataataaagcaatataaaaagctttttagtatggatgatattgagctt
accattacagatgaagctttggattatatggtaggtaaagctattgagtacaaacttggc
gcaagaggattgcgtagtttatgcgaggctatccttacagacgctatgtttgatcttcct
agttctgacgagaaatcgctgaatgtgactaagacgtacgcagagggtaaattgaataaa
tctacgctcaaaaaattgaaagcagcttcataa
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