Dokdonia sp. 4H-3-7-5: Krodi_0936
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Entry
Krodi_0936 CDS
T01484
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kdi03400
]
Krodi_0936
DNA repair and recombination proteins [BR:
kdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Krodi_0936
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA
Lon_C
AAA_24
AAA_22
AAA_5
AAA_16
CobU
NTPase_1
ABC_tran
AAA_18
AAA_14
AAA_23
NACHT
RsgA_GTPase
TniB
DAP3
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
AEE18920
UniProt:
F4B238
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Position
1070202..1071572
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AA seq
456 aa
AA seq
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MAKIKTTFFCQNCGTQHAKWQGQCNACKQWNTIVEEVVQKADKKDWKSETAKVSGLTRTS
KPLKIADISTASEARMNTKNGELNRVLGGGLVPGSLTLLGGEPGIGKSTLLLQISLALPY
KTLYVSGEESQQQIKMRAERINPESDQCYILTETKTQNIFRHIEEMQPDIVIVDSIQTLH
SDHIESTAGSISQIRETTSELIRFAKETATPVILIGHITKDGNIAGPKILEHMVDTVLQF
EGDRNHVYRILRAHKNRFGSTSELGIYEMQGSGLREVSNPSEILISKNDEDLSGTAIATT
MEGMRPLMIEIQALVSTAVYGTPQRSSTGYNVKRLNMLLAVLEKRAGFKLGAKDVFLNVT
GGITVDDPAIDLAVVAAVLSSNVDIPVDKSMCFAAEIGLAGEVRPVNRIEQRIVEAEKLG
FTSIVISKYCKIPDTNYHINVIKVAKVHDVVRHLFG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaataaaaactacctttttctgtcaaaactgtggcacacagcatgccaaatgg
caaggccagtgtaatgcttgtaagcagtggaataccattgttgaggaggttgtacaaaaa
gcagataaaaaggactggaagtctgaaaccgccaaggtttctggacttacacgcaccagc
aaaccccttaagattgccgatatttctaccgcttctgaggctagaatgaatactaaaaac
ggcgaacttaaccgtgttctaggtggtggcttagttcctggatcgcttactcttctgggt
ggagaacctggaataggaaaaagtactttgctactacagatatccctagcgctaccttac
aaaacactctacgtttctggagaggaaagtcagcagcaaataaaaatgcgtgcagagcgt
attaatccagaaagcgaccagtgttatatccttacagagacaaaaactcaaaatatcttt
aggcacatagaagagatgcagccagatattgtgattgtagactccatacaaacactgcat
tctgaccatatagaaagtaccgctggaagtatctcacaaatacgtgagactacttcagag
ctgatacgatttgctaaggaaactgcaacacctgtaattcttataggtcacatcacaaaa
gatggaaacatcgctggtccaaaaattcttgagcatatggtcgataccgttctccagttt
gaaggagatcgtaaccatgtttatagaattttaagggcgcataaaaaccgttttggaagt
actagcgaactaggcatctatgagatgcagggctcaggattaagagaggtgagtaatcca
agcgagattctcatttcaaaaaatgacgaagacttgagcggtacagcaatcgcaaccaca
atggaaggtatgcgaccgctcatgatagaaattcaagcacttgtgagtaccgcagtatat
ggaacaccacaacgtagctcgacaggatataatgttaagcgactcaatatgcttcttgct
gtattagaaaaacgcgcaggctttaaactaggtgcaaaagatgtttttctcaacgtgacg
ggagggatcactgtagatgatcctgctatagatctggcagtggtagcggctgttttatca
agcaatgtagatatcccagtagataaatccatgtgttttgcggcagagataggtcttgct
ggagaagtacgccctgtaaaccgtattgaacaacgcattgtcgaggcagaaaaactaggt
tttacaagcatcgtgatttcaaaatattgcaaaatacctgatactaattatcacatcaat
gtgattaaagtagccaaagttcatgatgtcgtgagacacctttttggataa
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