Dokdonia sp. 4H-3-7-5: Krodi_0963
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Entry
Krodi_0963 CDS
T01484
Name
(GenBank) CMP/dCMP deaminase zinc-binding protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi00240
Pyrimidine metabolism
kdi01100
Metabolic pathways
kdi01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Krodi_0963
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
kdi02044
]
Krodi_0963
Enzymes [BR:
kdi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
Krodi_0963
Secretion system [BR:
kdi02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
Krodi_0963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC_N
NAD1
APOBEC2
APOBEC4_like
APOBEC3
APOBEC1
NAD2
APOBEC4
Motif
Other DBs
NCBI-ProteinID:
AEE18947
UniProt:
F4AVD0
LinkDB
All DBs
Position
complement(1103767..1104195)
Genome browser
AA seq
142 aa
AA seq
DB search
MASKQHKYDIAYLRMAREWGKLSYCNRKQVGAIIVKDKMIISDGYNGTPTGFENVCEDDE
NNTKWYVLHAEANAILKVASSTQSCHGATLYITLSPCKDCSKLVHQAGIKRVVYHNAYKD
LTGVKFLEKAGVEIVHLQDIDS
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaaacaacataaatatgacatcgcttacttgagaatggctcgggaatgggga
aaactgtcatactgcaaccgtaagcaagtgggagcaattattgtaaaagataagatgatc
atttctgacggttataatggaacaccaactggttttgaaaacgtttgtgaagatgacgaa
aataatacgaagtggtatgtattacacgctgaggcaaacgcaattttaaaggttgccagt
tccacacaatcttgtcatggggctactctatatatcacattaagtccttgcaaggattgt
agtaaattagtacatcaggcaggtattaagcgtgtggtttatcataatgcatataaagat
ctcacgggtgtaaaatttttagaaaaagcaggcgttgagatagtacatcttcaagacatc
gattcataa
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