Dokdonia sp. 4H-3-7-5: Krodi_1109
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Entry
Krodi_1109 CDS
T01484
Name
(GenBank) UvrD/REP helicase
Organism
kdi
Dokdonia sp. 4H-3-7-5
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
RmuC
AAA_11
L_protein_N
eIF3_subunit
Motif
Other DBs
NCBI-ProteinID:
AEE19093
UniProt:
F4B261
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Position
1268255..1271395
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AA seq
1046 aa
AA seq
DB search
MTETNTFIVLNASAGSGKTYSLVKQYITTLLKSNDANKFRHLLAITFTNKAVAEMKNRVL
DTLKNIGHYEPGNKKPDMIDDLVSSSGLSEDVVIKKAKEILNRILHNYAAFDIVTIDTLT
HRIIRTFAKDLNISSSFEVSLDQKTLNAQAVDALIAKVGIDDEITKVLINFALEKADDDK
SWDVARDLLEIANLLHNENDLKALELIKDKSLTDFDTLTSYLQAQIKSLSSAQKQLGEDL
IALIHELGLDQKSFASGYFYKFMLQVANGVQGLPYTGSAYKDNITSYTFYTKTQKDHIKA
TIDGHRDHFIATFLKLKELASKQNMLESFRSKIIPLSVLHLIKKELELIKEDENVLLISD
FNALIAQSLKDQPAAFLYERLGERYTNYFIDEFQDTSVMQWDNLIPLIDNTISSQAEDTV
ANSLLLVGDPKQAIYRWRGGEAEQFIALSNQINPFSTPATIDRLETNYRSSAEIIDFNNQ
FFTHLSNHFNNELYREIYYKDNSQQTNSNTGGFVSLEFLEYDNKEEANEIYPARIIEIIN
EATSQGYLHSDICILTRNNIDGSLIATALQEANVEVVSSESLLISNSSTVQFIHAFATML
SYPSQIENRLPVLYFLTTYFNVEDTHSFYSINTSCTFLEFIEHLQRFDVFVHIDYMQTLP
LYEYLESIIRSFNLTAISDAYVVAYLDLAYSYSQSKSGGILGFIDYWEEKKEKSSIVAPE
QDSAVQTMTIHKSKGLEFPIVIYPYASSDLYRVRGEHQWYPIDDLAFGGFKTLMVPHNSA
LKDFGEAGKMLYETRNNEQQFDTINVLYVALTRAAERLYVLSRFRESKEKVNTYSDLFID
YLKTNNLWNEDQHTYTFGKETPAKKEDNKTDYNSFVPSFISTSKEELGIQIITQATFLWD
EQKQNAITYGNLIHELMAQINSYTDVQHVLENAVKQGIVPEEGYETINNVLRSITSNQRL
ADYYQDQNTVYNERMILSSDGSFYIPDRVVVLPNGDTTIIDYKTGMHNPSHSKQISMYAK
LYEEMGFKVANKFLVYIDATVDVISV
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaacaaatacgtttatcgtacttaatgcttctgcgggatctggaaaaacatac
agtctcgtaaagcaatatattactacacttctcaagagcaatgatgctaataagtttaga
catcttcttgctataacctttacaaataaggcggtagccgaaatgaaaaatcgtgtgcta
gacacgctcaagaatataggtcattatgagcctggcaataaaaaaccagatatgatagac
gatttagtttcatctagtggattatctgaggatgtagtcataaagaaggctaaagaaata
ctcaatcgcatactacataattatgctgcctttgacattgtaacaatagatacgcttaca
catagaatcatccgcacttttgcaaaagatctaaatatctctagtagttttgaggtttct
ctggatcaaaagacactcaatgctcaagcagtagatgccctcattgcaaaggtgggtata
gatgatgagattactaaagttctaataaattttgctttggaaaaagcagatgatgataag
agctgggacgttgctcgagatttactcgaaatagcaaatttattacacaatgaaaacgat
cttaaggcgctagagcttataaaagacaagtctcttacagattttgacacattaacgagc
tatttgcaagctcagattaagtcactttcctctgcacaaaaacagctaggagaggatctt
atagcattgattcatgaactcggattagatcaaaaaagctttgcaagtggatatttttat
aaattcatgctccaagttgcaaacggggtacagggacttccatatacaggatcagcttat
aaagataatattacgtcttacaccttttatacaaagactcaaaaagaccatatcaaagct
accatagatggtcatcgggatcattttatagcaacgtttttgaagcttaaggagcttgct
tctaagcagaatatgttagaatcttttagatctaagattatcccactttctgtattacac
ttgattaaaaaagagctagagcttatcaaagaagatgaaaatgtgttactcatctcagat
tttaatgcgcttatagcgcagtcgctcaaagatcagcctgcagcttttttatatgaaaga
cttggtgagcggtacacaaattattttatagatgagtttcaagatacatcggtaatgcaa
tgggacaatttaatcccgcttatagataacaccataagtagccaggcagaagatactgtg
gcaaattctttgttacttgtaggagatcccaaacaagcaatctataggtggaggggtgga
gaagcagagcaatttatagcgttgagtaatcaaataaaccccttttcaaccccagcaact
atagaccgcctagagactaactatagaagtagcgccgaaattatagactttaataatcag
ttttttacacatctctcgaatcattttaacaacgagttatatcgcgaaatttattataaa
gacaactcacaacaaactaatagcaacacaggcggctttgtctctcttgagtttttagaa
tatgataataaagaagaagcaaatgaaatatatcctgcgcgcattattgaaattataaat
gaagctactagccaaggctacttacatagtgacatttgtatacttacgagaaataatata
gatggctcattaatagcaactgccttacaagaggcaaatgtagaagttgtgtcttctgag
agcttgctaatctcaaactctagcacagtacaatttattcatgcatttgcaacaatgctc
tcctaccctagtcaaatagaaaatagattgcctgtactttactttttgacgacttacttt
aatgtggaagacacgcactcattttatagtattaatacctcatgtacatttttagaattc
attgagcatttacagcgatttgatgtttttgtgcacattgactacatgcaaacgctacct
ctctatgaatatctggaatcgataataagatcttttaacctcacagcaatttctgatgct
tacgtagtggcttatcttgatcttgcttatagttactcacaaagtaaaagcggtggcatc
cttggttttatcgactattgggaagaaaaaaaggagaaatctagtattgttgctccagaa
caggacagtgcggtacagactatgaccatccataagtctaaaggattagaatttcctatt
gttatctacccatatgcaagttcagatttatatagagtacgaggagaacaccaatggtat
cccatagatgatctagcttttggaggatttaaaacgttgatggttccccataatagtgct
cttaaagatttcggtgaagctggtaaaatgctatatgagactagaaataatgagcagcaa
tttgacaccattaatgtcttgtacgttgcactcacaagagccgcagaacgattatatgtg
ttgtcacgctttcgcgaaagcaaagaaaaagtaaatacctacagtgatttgtttatagat
tatcttaaaacaaataatttatggaatgaagatcaacatacctatacttttggtaaagaa
acacctgcaaagaaagaagacaacaagacagattacaactcatttgttccttccttcatc
tctacctcaaaagaagaattgggcattcagatcatcactcaggctacttttttatgggat
gaacaaaaacaaaatgctattacctatggtaatctcatccatgagctaatggctcagatt
aatagttacacagacgtccagcatgtactagaaaatgccgtaaagcaaggtattgtccca
gaagaaggatatgaaaccatcaataatgttcttcgcagtattacgagcaatcaacgacta
gcagattattatcaagatcaaaatacggtttacaacgagcgaatgattttatctagtgat
ggttcattttatataccagatagagtggttgtattgcctaatggtgataccacaattata
gattacaaaacaggaatgcacaatccatcacacagtaaacagatttctatgtatgcaaag
ctatatgaagaaatgggttttaaagtagctaataaatttctagtatatatagatgccact
gtagatgtaatatctgtttaa
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