Dokdonia sp. 4H-3-7-5: Krodi_1111
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Entry
Krodi_1111 CDS
T01484
Name
(GenBank) OmpA/MotB domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kdi02000
]
Krodi_1111
Transporters [BR:
kdi02000
]
Other transporters
Pores ion channels [TC:
1
]
Krodi_1111
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
AEE19095
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Position
1272731..1274146
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AA seq
471 aa
AA seq
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MKHLSRFLVAALMILAVGSSVNAQDANNPWGFSIGVNAIDTYPVGDALDGVPGAGETRGN
LFEEFYNVEDHWSILPSVSYINVSRYLGDGFVFGVSGSINRIEKLGDSRPRNELQYYGAD
GDFSYSLRDLINGEGGWFDPSISVGAGYTWVESTLDGDLDGFGTANAAAGVKIWLGENIN
VGVQSKYKHAFEDEGIKHFQHVAAIGIVFGGKDTDGDGIYDKEDACPEVAGLPEFNGCPD
SDGDGIEDSKDACPTVAGLAEFDGCPDTDGDGIPDPKDACPTVAGVAALGGCPDADGDGI
KDADDACPNEAGPRSNNGCPFEDKDGDGVLDKDDECPDVAGTVANNGCPEVSVEVLNELN
LETKKVLFDYNKASIRTESYATLDKVASVMMEYPTTRFLIEGHTDDRGRDAYNLDLSDQR
AASVRSYLTGKGIPAARLESKGFGEARPVASNKTAAGRQENRRVELSILEQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatcttagcagatttttagttgcagcgcttatgattctagctgtaggatcatca
gtaaatgcacaagacgcaaacaacccttggggcttctctattggagttaacgccatcgat
acgtatccagtaggagatgcacttgatggagttcctggtgcaggagaaacaagaggaaac
ctttttgaagaattttataatgtagaagatcactggagcattcttccatcggtttcatac
attaatgtatctcgttacttaggagatggattcgtatttggcgtttctggttctattaac
agaattgaaaaactaggtgattcaagacctagaaatgaattacagtattacggtgcagat
ggagatttttcttatagtttaagagatcttatcaacggtgaaggtggatggtttgatcct
agtatttcagttggtgctggttatacttgggttgaaagtacgcttgatggagatcttgat
ggtttcggtacagcaaatgctgcagcgggtgtaaaaatctggttaggagaaaacatcaac
gttggtgttcaatctaaatataagcatgcttttgaagacgaaggaattaagcacttccaa
catgttgcagctataggtattgttttcggaggaaaagatactgacggtgatggtatatat
gataaagaagacgcttgtcctgaagttgcaggtttgcctgaatttaacggttgtcctgat
tctgacggagatggtatcgaagattctaaagatgcttgtcctactgttgctggtctagct
gagtttgatggttgtcctgatactgacggagacggaatccctgatcctaaggatgcatgt
ccaactgttgctggagtagctgctttaggtggttgtcctgatgctgatggtgacggaatc
aaagatgctgatgatgcttgtcctaatgaagctggaccacgttcaaacaacgggtgtcct
tttgaagataaagatggtgacggtgttcttgacaaagatgacgaatgtccagatgttgca
ggaactgtagcaaataatggatgtcctgaagtatctgttgaagttcttaacgaactaaac
ttagaaactaaaaaggtactttttgattacaataaagcatctataagaactgaatcttat
gcaactcttgataaagtagcatcagtaatgatggaatacccaacaactcgtttccttatt
gaaggtcacactgatgatagaggtcgtgatgcttataacttagatctttctgatcaaaga
gcagcttcagtaagaagttacttaacaggaaaaggaatcccagctgctcgtttagagtct
aaaggatttggtgaggctagaccagttgcttcaaataaaactgctgcaggacgtcaagaa
aacagacgtgttgagctttctattcttgagcaatag
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