Dokdonia sp. 4H-3-7-5: Krodi_1178
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Entry
Krodi_1178 CDS
T01484
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi03030
DNA replication
kdi03430
Mismatch repair
kdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Krodi_1178
03430 Mismatch repair
Krodi_1178
03440 Homologous recombination
Krodi_1178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kdi03032
]
Krodi_1178
03400 DNA repair and recombination proteins [BR:
kdi03400
]
Krodi_1178
Enzymes [BR:
kdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Krodi_1178
DNA replication proteins [BR:
kdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Krodi_1178
DNA repair and recombination proteins [BR:
kdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Krodi_1178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
AEE19162
LinkDB
All DBs
Position
complement(1350097..1351314)
Genome browser
AA seq
405 aa
AA seq
DB search
MVLLANIIDTEDKKCSDSFIFDAMLFSNVIGQDFIKNHLTTSVDAGRIAHAQLFIGLSGT
GVLPMAIAYAQYILCNNAQGENEGGSQACNLKFEHLSHPDLHFAFPVATTPEVKSHPVSN
NFMREWRSFITENPYGDLFEWHQHLGIEKKQGQIGVDEASEINKALALKSYEGGYKVMII
WAVDKMNTAGSNKLLKLLEEPPAKTLFILISENEDSIIDTIKSRCQVLHFPRLSEPQIAD
ALITHHKTPDAEAHKIAHQAQGDYQQAMHLLHHDGDDIQFEKWFVTWVRTAFQAKGKKEA
VLGLMEWSEIIAKSGRETQKNFLAYCVQFFRQALLKNYKANDLVFMETETGFDLSKFAPF
VHNNNIFPIVEAIQEASYHIERNGNAKIIMTDLSIKLTRFLHRKS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
ttggttttactagcaaatataatagatacagaggataaaaaatgcagtgattcctttata
tttgacgctatgctgttttcaaacgttatcggacaagattttattaaaaatcatctcaca
acaagtgttgatgcggggcgtattgctcatgctcaacttttcataggtttatctggcaca
ggggttttacccatggcgattgcttatgcacaatatattttatgtaataacgctcaaggc
gaaaatgagggaggatcgcaagcttgtaatttaaagtttgagcacttatcgcatccagat
ttgcactttgcttttcctgtggcaactactcccgaagtaaaaagccatcctgtctctaat
aattttatgagagagtggcgctcgtttattacagaaaacccatatggtgatctctttgaa
tggcaccagcatcttggtattgaaaaaaaacaaggacagataggtgtagatgaagcttct
gaaattaataaagctctcgctttaaagtcatatgaaggtggttataaagtaatgatcatt
tgggcagttgataaaatgaatactgccgggtcaaataaacttctcaaactattagaggag
ccaccagcaaaaacgttgtttattcttatttctgaaaatgaagacagcattattgacaca
ataaagtcaagatgccaagtattacatttcccaagattaagcgaaccacaaattgcagat
gctttaattactcatcataaaactccagatgccgaagctcataaaatagcccatcaagca
caaggagattaccagcaagcgatgcatttattgcaccacgatggagacgatattcagttt
gaaaaatggtttgttacttgggtacgtacagccttccaagcaaagggtaaaaaagaggcc
gttttaggactcatggagtggagcgaaatcatagcaaaatctggccgtgaaacacagaaa
aattttcttgcttactgtgtacaatttttccgtcaagctttgcttaaaaattacaaggca
aatgatcttgtttttatggaaacagagaccggttttgatctctcaaaatttgctcctttt
gtacataataataatatatttcctatcgtagaagccattcaagaggcttcgtatcatata
gaacgcaatggaaatgctaagattatcatgacagacctttctataaaattaactcgattt
ctacatcgtaagagttga
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