Dokdonia sp. 4H-3-7-5: Krodi_1385
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Entry
Krodi_1385 CDS
T01484
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kdi03032
]
Krodi_1385
03036 Chromosome and associated proteins [BR:
kdi03036
]
Krodi_1385
03400 DNA repair and recombination proteins [BR:
kdi03400
]
Krodi_1385
DNA replication proteins [BR:
kdi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Krodi_1385
Chromosome and associated proteins [BR:
kdi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Krodi_1385
DNA repair and recombination proteins [BR:
kdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Krodi_1385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
AMPK_alpha_AID
UBA_2
PqqD
Motif
Other DBs
NCBI-ProteinID:
AEE19368
UniProt:
F4B1D0
LinkDB
All DBs
Position
1549609..1549899
Genome browser
AA seq
96 aa
AA seq
DB search
MTKADIVAKVSEKLGIEKNDVQATIESFMEEVKTSLEGGDNVYLRGFGSFIIKTRAEKTG
RNISKNTTIKIPAHNIPAFKPAKVFVEGVKTNVSVD
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagctgatatcgtagctaaagtttctgagaaactaggtatcgaaaaaaatgac
gtgcaagcaactattgaatctttcatggaagaagtaaaaacttctttagaaggtggagat
aacgtgtacttaagaggattcggtagctttattatcaaaaccagagcggaaaaaacaggt
agaaatatttcaaaaaatacgactatcaaaataccagcacataatattccagcgttcaag
cctgctaaagtttttgtagaaggtgtaaaaacgaacgttagtgtagactaa
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