Dokdonia sp. 4H-3-7-5: Krodi_1386
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Entry
Krodi_1386 CDS
T01484
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kdi03019
]
Krodi_1386
03009 Ribosome biogenesis [BR:
kdi03009
]
Krodi_1386
Messenger RNA biogenesis [BR:
kdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Krodi_1386
Ribosome biogenesis [BR:
kdi03009
]
Prokaryotic type
rRNA processing factors
Krodi_1386
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
UBX
MobC_2
S1
MetW
Motif
Other DBs
NCBI-ProteinID:
AEE19369
UniProt:
F4B1D1
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All DBs
Position
1550225..1551775
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AA seq
516 aa
AA seq
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MNKELIIRSSSSVVDFALLKDGKLIELHKEEDKNKFNVGDIYIANVRKTVSGLNAAFVNV
GYEKDAFLHYHDLGPKLPTLQKYIKSVTTGKLKDYSLQNFTFEKDIDKNGKIAEVLKSKQ
SVLVQIAKEPISTKGPRISSELSIAGRYIVLVPFSDRISISQKIESKEEKARLKRLVTSI
RPKGFGVIVRTVAQGVKVAELDKDLQNLVDKWTTMSKKIPNAHHPSKVLGEMNRASSILR
DIFNDSFTSITVDDETLYYQIKDYLSEIAPHKENIVKLYNNQLPIFEKFGIERQIKTSFG
QTVSMSRGAYLVIEHTEALHVVDVNSGNRSNKAKSQEDTALEVNMIAASEIARQLSLRDM
GGIIVIDFIDMGKAEHRRQLFNHLKDEMKDDRAKHKILPPSKFGLIQITRQRVRPEMNIK
TREENPNGGSNEIEAPIVIVEKLQGQLNRILKSGAKKVTLHAHPFVAAYITKGFPSIRSK
WFLDHKKWVKVMPRDAYTYLEYNFTDASGKDIKIEN
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagaattgatcattagatctagttcctccgtagttgattttgccttattaaaa
gatggaaaacttattgagcttcataaagaagaagataaaaataagtttaacgtaggtgat
atttatatcgcaaacgtaagaaagaccgtttctggtctcaatgccgcatttgtaaatgtg
ggctatgagaaagatgcatttttgcattaccatgacctcggtcctaaacttcctacgctt
cagaaatacataaaaagtgttactacaggtaaattaaaagactattccttacaaaatttc
acctttgagaaagacatagacaaaaacggtaaaattgccgaagttcttaagtctaaacaa
agtgtacttgtacagattgcaaaagaacctatctcgaccaaagggcctcgcataagtagc
gagctgtctattgctggacgttatattgttctcgttcctttttctgaccgtatctctatc
tcacaaaagattgagagtaaagaagaaaaagcacgtcttaaaagacttgtaacaagtatc
aggcctaaagggtttggcgttatcgtacgcacagtagctcaaggtgtaaaagttgcagaa
ctagacaaagacctgcaaaatctagtggacaaatggaccactatgagcaaaaaaattcca
aacgctcaccatcctagcaaagttctaggagagatgaatcgtgcatcgtctatcctgcgg
gatatttttaacgatagcttcacgagcatcactgtagatgatgagacgttgtattatcaa
attaaagattatctaagcgagattgctccacacaaggagaatattgtaaaattatataat
aaccaactacctatttttgagaagtttggtattgagagacagattaaaacgtcttttggt
cagactgtatcaatgagccgtggtgcttatcttgtaattgaacatacagaagccctgcac
gttgtagacgtaaacagtggtaacagatcaaataaagctaaaagtcaagaagatactgca
cttgaggtaaatatgatcgccgcttcagaaattgcacgtcagcttagcctccgtgatatg
ggaggaattatcgtaatcgattttatcgatatgggtaaagctgaacaccgccgccagtta
tttaatcacctcaaagatgagatgaaagatgatcgcgcaaaacacaaaatattacctcct
agtaaatttggacttatccagattactaggcagcgagtacgtccagaaatgaacattaag
acccgtgaagaaaatcctaacggtggctctaatgagatagaagctcctattgtaatagta
gagaagcttcaaggacaactcaaccgcattttaaaatctggtgcaaaaaaggtgacgctt
catgcacacccatttgtagcagcttatattacaaaaggatttccatccataagatctaaa
tggtttttagatcacaagaagtgggtaaaagtaatgccacgagatgcatacacgtatctt
gagtataactttacagacgcttcgggtaaggatatcaagattgaaaattag
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