Dokdonia sp. 4H-3-7-5: Krodi_1637
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Entry
Krodi_1637 CDS
T01484
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Krodi_1637
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
kdi01007
]
Krodi_1637
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kdi03016
]
Krodi_1637
Enzymes [BR:
kdi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Krodi_1637
Amino acid related enzymes [BR:
kdi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Krodi_1637
Transfer RNA biogenesis [BR:
kdi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Krodi_1637
Prokaryotic type
Other AARSs
Krodi_1637
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AlkZ-rel
Motif
Other DBs
NCBI-ProteinID:
AEE19620
UniProt:
F4B2M0
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All DBs
Position
complement(1854469..1856163)
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AA seq
564 aa
AA seq
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MQLSEQEQVRRQKLSRLREIGINPYPAAQYHVTHSSKQAIGNYKEGEKVVMAGRLMRKKI
QGSASFGEIQDGEGRIQLYFNRDEICPGEDKSHYNEVFKKLLDLGDFIGVEGTLFTTQVG
EITVSLTGFTLLSKALKPLPLPKTDAEGNTYDEFIDPEMRYRQRYADLAVNPHVKEVFVK
RTKLFNAMRNFFNNAGYFEVETPILQPIAGGAAARPFVTHHNSLDMPLYMRIANELYLKR
LIVGGFEGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMEFCEQLLEHCAMAVN
GTTKATFGEHEVDFKAPYARVTMADSIKHFTGFDILDKTEDEIRAAAQGMGIEVDETMGK
GKLIDEIFGEKCEGNYIQPTYITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYS
ELNDPIDQRERFEAQLELAKRGDDEATASIDYDFLRSLEYGMPPTSGMGIGMDRLIMFLT
NNQSIQEVLFFPQMKPEKKALDLNENEKAIYDLLKKESPQELGALKAAAGLSNKGWDKGL
KGLTKLGAAKVSKTDEGLFVTIAD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgtcagaacaagaacaagtacgccgtcaaaaattatcccgcttgcgcgaaata
ggaatcaatccttatccagcagcacaataccacgttactcatagctctaaacaggctatc
ggaaattataaagagggtgagaaggtagtgatggcaggtcgcttgatgcgaaagaagatt
caaggttctgcatcttttggagagatccaagatggtgaaggtcgcatacaattatacttt
aaccgtgacgagatttgcccgggagaagataagtctcactataacgaggtatttaaaaag
cttcttgacttaggtgatttcattggtgtagaaggaacgttgtttactacacaagtaggt
gagattacggtatcacttactggtttcacactattgagtaaagcacttaaaccattacca
ttacctaaaacagatgcagagggtaacacctatgatgagtttatagatccagaaatgcgt
taccgccagcgttatgcagatcttgctgtaaacccacacgtaaaagaagtatttgtaaaa
cgcaccaagctttttaatgcgatgcgtaacttctttaacaacgcaggatattttgaagta
gagactcctatcctacagcctattgctggaggagctgcagcacgaccatttgtgacgcac
cacaactcactagacatgccattatatatgcgtattgcaaatgagctgtacttaaagcgt
ctcattgttggcggatttgaaggtgtgtatgagttctcaaagaacttccgtaatgaaggg
atggaccgcacgcacaatccagagtttaccgcaatggaaatctatgtagcttataaagac
tacaactggatgatggagttttgtgagcagttactagaacactgtgcgatggcagtaaac
ggaactacaaaggcaacctttggtgagcacgaagtagattttaaagcaccgtatgctaga
gtaaccatggcagatagtatcaagcactttacaggttttgatattcttgataaaacagaa
gatgagatacgcgctgctgcacaaggcatgggtatcgaggtagatgagactatgggtaaa
ggaaaactcatcgatgagatttttggtgagaagtgtgagggcaactacatacagcctacc
tacatcacagactaccctaaagagatgagcccgctatgtaaagagcaccgtgataaccca
gaacttacagaacgttttgagttgatggtttgtggtaaagagattgcaaatgcatactca
gagcttaacgaccctatcgaccagcgtgagcgttttgaggcacagctagaacttgcaaag
cgtggtgatgacgaggcaacagcttctatagattatgacttcttgcgttcattagagtac
ggaatgcctcctacctcaggaatgggaatagggatggaccgtttgattatgttcttgact
aataaccagtctatacaagaagtactgttcttcccacagatgaaaccagaaaagaaggca
cttgatcttaacgagaacgaaaaagcaatttacgacctccttaaaaaggaaagcccacaa
gaacttggcgcacttaaagctgcagcaggtttaagtaacaaaggatgggacaaaggcctt
aaaggtcttaccaaactaggcgctgccaaagtttctaaaacagacgaaggtttgtttgta
accattgcagactaa
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