Dokdonia sp. 4H-3-7-5: Krodi_1650
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Entry
Krodi_1650 CDS
T01484
Name
(GenBank) Peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi00550
Peptidoglycan biosynthesis
kdi01100
Metabolic pathways
kdi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Krodi_1650
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Krodi_1650
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kdi01011
]
Krodi_1650
Enzymes [BR:
kdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Krodi_1650
Peptidoglycan biosynthesis and degradation proteins [BR:
kdi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Krodi_1650
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AEE19633
UniProt:
F4B2N3
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Position
complement(1880253..1882121)
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AA seq
622 aa
AA seq
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MRKLLLLFIVLTTGVLFIARLFYLQVYDTSAAVLSESNAIKQQFEIPQRGRIYDRYGELL
VSNQPSYDLMAIPREIKPFDTLKLCSLLNIDKEKLVKQLNKAIHYSPRHPSVIVPTMSQE
EFAYLGEQMRKFEGFFIQKRSLRDYQIDFGANFLGYIQEVHQGIIDKQPYYISGDLIGRQ
GVEQKYEELLRGKKGIKYLQKDRFNRVIGPYKEGTLDQEPEEGKNIYLTIDSELQKYGEE
LMQGKRGGIVAIEPSTGEILALVAAPNYDPALMVGRERSKNYSKLDNDSIAKPLYDRALL
GEYAPGSPFKALTGLIALQEGAIGLDDRVYCNGGMRYGRGRTFGCHHHKSPVQMISGIAY
SCNAYFGTAYLNTLNKYDTPQEGIAAWQGHLKSFGLGDFMGYDLPIGRPGFIPGASYYNK
IHDYPNRRWGSAATLSNSIGQGEVALTPMQMAHFTATIANRGWFYRPHIIKKIEGQDTIP
SQFEQKNYTTIDAKHFEPVIQGLNDVYNYGTAANLKVPGIDISGKTGTAENYAKIDGVTT
QLTDHSTFVAFAPKDKPKIAIAIFVENGYWGSRYGGRIASLMIEKYINREVTRKDLEQWI
LTHTLEEEYAKPLSGKPFKINY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattactactcctctttattgttcttactactggtgtactctttattgctaga
ctattttatctgcaggtgtatgacacctctgcagctgttttatctgagagtaacgctata
aagcaacaatttgaaatcccacaacgtggtcgtatttatgaccgctatggagaactttta
gtttctaaccagccatcatatgatttaatggctatacctagagaaatcaaaccttttgac
acgctcaagctatgctcattattaaatattgataaagaaaaacttgtaaaacaacttaac
aaggcaatacattattctcctaggcatccttctgttatagtgcctactatgtcacaagaa
gaatttgcatacttaggcgagcaaatgcgcaagtttgaaggcttctttatccagaaaaga
tcattacgtgactatcagatagactttggcgcaaactttcttggatacatccaagaagta
caccaagggattattgataaacagccttactatataagcggagatttaataggacgacaa
ggtgttgaacaaaaatatgaagagctcctaagaggaaaaaaagggatcaaataccttcaa
aaagatcgatttaatcgtgttataggcccttacaaagaaggcacacttgatcaagaacct
gaagaaggaaagaatatatatcttaccatagattctgaacttcaaaaatatggagaagaa
ttaatgcaaggtaagcgcggtggcattgtagccattgagccatctactggagaaattcta
gcacttgtggctgctcccaattatgaccctgctttaatggtaggtcgtgagcgatctaaa
aattattcaaaacttgataacgactctattgcaaagcctctttatgacagagcattgcta
ggagaatatgcgccaggatcaccttttaaagcacttacgggactcattgcactccaagaa
ggagcgattggtcttgatgatagagtgtattgtaatggaggaatgagatatggtagagga
aggacctttgggtgtcaccaccataaaagtccagtacaaatgatcagtggtattgcttac
tcttgtaatgcctactttggaactgcttacttaaatactctcaataaatacgatacgcca
caagaaggtattgctgcatggcaaggccaccttaagagttttggactaggagattttatg
ggttatgacttacctataggaagaccaggtttcattccaggggcttcatactataacaaa
atccatgattaccctaatagaagatggggaagtgctgcaacattatctaactctattgga
caaggggaagttgcacttactccaatgcaaatggcacactttacagcaactattgcaaat
agaggctggttttacagaccgcacatcataaaaaaaatagaaggacaagacacgattcct
tctcaatttgaacagaaaaattataccactatagatgcaaaacactttgaacctgtgata
caagggctcaatgatgtgtacaattatgggactgcagcaaacttaaaagtacctggaata
gatatttcaggtaaaacaggtacagcagagaattatgctaaaatagatggagtaacaaca
cagcttacagaccactctacttttgtagcctttgctcctaaagacaaaccaaagattgct
attgccatctttgtagaaaatgggtattggggatctcgttacggtggccgtatcgcatct
ctcatgattgaaaaatacattaacagagaagtaacgcgtaaggatttagaacaatggatt
ctcacacatacccttgaggaagaatatgctaaaccattgagtggcaagccttttaaaata
aattattaa
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