KEGG   Dokdonia sp. 4H-3-7-5: Krodi_1704
Entry
Krodi_1704        CDS       T01484                                 
Name
(GenBank) Type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
kdi  Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:kdi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:kdi02048]
    Krodi_1704
Enzymes [BR:kdi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Krodi_1704
Prokaryotic defense system [BR:kdi02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Krodi_1704
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N Helicase_C HSDR_N_2 SNF2-rel_dom AAA_16 AAA_19 SLFN-g3_helicase HTH_12
Other DBs
NCBI-ProteinID: AEE19687
UniProt: F4AW09
LinkDB
Position
1934551..1937349
AA seq 932 aa
MNESTTRKELIDVQLKEAGWDINDHTQVVEEYIVDLLAKNQVDEPARNYKKNQFSDYVLL
GKNGKPLAVVEAKKSTKDAKTGREQAKQYCYNIQMETKDILPFCFYTNGHEIFFWDLENA
PPRKVIGYPTREDLERYQYIREAKKPLTTELINTNVAGRDYQIRAIRSVMDGLEQKRRTF
LIVMATGTGKTRTTIALVEALMRAGWAEKALFLVDRIALRDQALEAFKEHLPNEPRWPKQ
GEKSIAKDRRIYISTYPTMLNIVREEKETLSPHFFDLIVVDESHRSIYNTYKEVLDYFNT
ITIGLTATPTDVIDHNTFKIFNCEDGLPSFAYTYEEAVNNIPPYLCNFQVMKIKTKFQTD
GISKRTVSLEDQKKLILEGKEISEINFEGVELEKKVINRGTNTLIVKEFMEESIKDINGV
LPGKTIFFCANIAHARRIEEIFDQLYPQYNGELAKVMVSEDSRVHGKGGLLDQFKNKDFP
RVAISVDMLDTGIDIRELVNLVFAKPVYSYTKFWQMIGRGTRLLEPTQMKSWCTEKDVFL
ILDCWDNFEYFKLKPKGKELKQAIPIPVKLFGLRLDKLEFALEASIQNTIEEECKRLQKQ
IILLPANSIVIKENSKGIAKVNNPDFWENINSEKIDFLKAEILPLMRTISGVDYKAMRFE
KDILEVSLAKMQNEVEKYNMLKDALIERISDLPLSLNIVSKQQELIKNAQRIHFWNNVKE
NNFNSLIDKLSPLARYIDTRENTSGPSKFNFEDELVAKEMVEFGPQNEAVSITRYKEMVE
EKIKELMESNPILQKIVTGNAITEEEIEILAQELHEENPHITIGLLRRVYQNKKAKFIQF
IKHILGLEVLETFTDSLSNAFDNFITEHNDLSSRQLQFLDILKKYILEKGNLEKKNLIES
PFTMIHPEGIRGIFSPKEINEILQLTTKILAA
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgaacgaatcaactacaaggaaagaactcatagatgttcagctaaaagaagctggatgg
gatataaacgatcacactcaagttgtagaagaatatattgttgatttattagctaaaaat
caagtagatgaaccagctagaaactataaaaagaatcagttttcagattatgttctatta
gggaagaatggaaaacctctagcagttgtagaagctaaaaaaagtactaaggatgcaaaa
actggtcgcgaacaagcaaaacaatattgctataatattcagatggaaacaaaagatatt
ttgcctttctgtttttacactaacggtcacgagatattcttttgggatttagaaaatgct
ccaccaagaaaagtgattggttatcctactcgagaagatctagaaaggtaccagtatatt
agagaagcaaaaaagccacttaccacagaattaataaataccaatgtagcaggaagagat
tatcaaataagggctatccgttctgtaatggatgggctagaacaaaaaagaagaacattt
ttaattgtaatggcaactggtactggaaaaaccagaactaccattgcattagttgaagcg
ctaatgagagcagggtgggcggaaaaagctctatttttagtagataggattgctttaaga
gaccaagcgcttgaagcttttaaagagcatttgcctaacgaacctagatggcctaaacaa
ggagaaaaaagtattgcaaaggatagacggatttatatctctacttatccaacaatgctg
aatattgttcgtgaagaaaaagaaactttatcacctcacttttttgatttaatagtggta
gacgaaagtcaccgaagtatttacaatacctataaagaagtattagattattttaacacc
attactattggcttaactgctacaccaacagatgttattgaccataacacctttaaaata
tttaattgtgaagatggtttgccgtcttttgcttatacctatgaagaagctgtaaataat
atccctccgtatttgtgcaattttcaggtaatgaaaattaaaaccaaatttcaaacggat
ggcattagcaaaagaactgtttccttagaagaccaaaagaaattaattcttgaaggaaag
gagatttccgaaatcaattttgaaggcgtagagttagaaaagaaagtcataaatagaggg
acaaatacacttattgtaaaggaatttatggaggaatccataaaagatatcaatggtgta
ttgcctgggaaaacaatatttttctgtgccaatattgctcacgcaagacgcattgaagaa
atatttgaccaactctatccacaatacaatggggaattagccaaagtaatggtttctgaa
gattcaagagttcacggaaaaggaggtttactagaccagtttaaaaacaaagattttccg
agagttgctattagtgtggatatgttagatactggtatcgatattagagaattggtgaac
ttagtttttgcaaaacctgtttactcttataccaaattttggcaaatgattggaagagga
actcgtttactcgaacctacacaaatgaaatcttggtgtactgaaaaagacgttttctta
attttagattgttgggataattttgaatatttcaagctaaaaccgaaaggaaaagaacta
aaacaagccatacctattcctgtaaaactattcggtttacgattagataaattagagttt
gcacttgaagctagtattcaaaatacgattgaggaagaatgcaaaaggctacaaaaacaa
atcatactgctacctgcaaactcaatagtcataaaagagaatagcaaaggtattgcaaaa
gttaacaaccctgatttttgggaaaatataaattctgaaaaaatagacttcttaaaagct
gaaatacttcctctaatgcgaactatttctggtgtagactataaagctatgcgttttgag
aaagatattttagaggtttctttagcaaaaatgcaaaatgaagtcgaaaagtacaatatg
ctcaaagatgctttaatagaacgtatttctgatttaccgctatcattaaacatagtatcc
aaacaacaagaacttataaaaaatgctcaacgaattcatttttggaacaatgtcaaagaa
aacaacttcaatagtttaatagataaattgtctcctctcgctagatatattgacaccaga
gaaaatacttctggaccttctaaatttaattttgaagatgaacttgtcgctaaagaaatg
gtagaatttggaccacaaaatgaagctgtaagtattacacgctacaaggaaatggttgaa
gaaaagattaaagaattgatggaatcaaatcctattcttcaaaaaatagttactggtaat
gcgattactgaagaagaaatcgaaatactagctcaagaattacacgaagaaaatcctcat
attactattggtttattgcgtagagtttatcaaaataaaaaagcaaagtttatacagttt
ataaagcatattttaggccttgaagtattagaaacttttacggatagtctttccaatgct
tttgataattttattaccgaacataatgatttatcgagccgacaactgcagtttctagat
atcttaaaaaaatacattctagaaaaaggaaatttagaaaagaaaaacttgatagaatca
ccgtttacaatgatccacccagaaggaataagaggcatattttcgccaaaagagattaac
gaaatcctccaattaacaacaaaaatattagcagcataa

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