Dokdonia sp. 4H-3-7-5: Krodi_1709
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Entry
Krodi_1709 CDS
T01484
Name
(GenBank) alpha-L-glutamate ligase, RimK family
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kdi03009
]
Krodi_1709
Ribosome biogenesis [BR:
kdi03009
]
Prokaryotic type
ribosomal protein modification factors
Krodi_1709
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
Dala_Dala_lig_C
Kdo
R2K_3
Motif
Other DBs
NCBI-ProteinID:
AEE19692
LinkDB
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Position
1943667..1944539
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AA seq
290 aa
AA seq
DB search
MRIVVLSQNPNLYSTKRLIEAGEKKGHEMIIIDHTKCNLVIEKKNPTIVYKGKEIKDIDG
VIPRIGASVTFFGTAVVRQFEMMKVFSATESQALVRSRDKLRSLQILSRAGLGLPKTVFT
NYSKDVGQVVDGVGGAPLVIKLLEGTQGLGVVLADNKNSAESILEAFNGLQARVIAQEFI
KEAGGADIRVFIVDGVVVGAMKRQGKEGEFRSNLHRGGSANVIELTDEEENAALKAAKAM
GLGIAGVDLLQSARGPLILEVNSSPGLEGIETATGKNIANYIIKYVERNA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgtagtgctatcacaaaatccaaatttatattcaacaaagcgtcttatcgaa
gcgggggagaaaaaaggtcacgagatgatcattatcgaccatactaagtgtaacctcgtt
attgaaaagaaaaacccaactattgtctataagggtaaggaaataaaggatattgatggg
gtaatcccgagaataggggcttctgtaacattttttggtacagcagtagtgagacaattt
gagatgatgaaggtcttctctgcaacagaatcgcaagcattagtaagatcacgtgataaa
ttaagaagtttacagattttatcaagagccggtttaggacttcctaaaacagtttttact
aactactctaaggatgttggtcaggttgtagatggagtaggaggagcgccacttgtaatt
aaattacttgaaggaacgcaaggcctaggtgtagtactagcagataataagaactctgca
gagtctatactagaagcttttaatggattacaagcaagagtaattgctcaagaatttatt
aaagaagctggaggagcagatatacgtgtgtttattgtagatggagtagtagtgggagct
atgaaaagacaaggtaaagaaggagagtttagatctaacttacacagaggaggaagtgca
aacgtaatcgaactcacagacgaagaggaaaatgcagcacttaaagccgcaaaagcaatg
ggattaggaattgcaggagtagatctcttacaatctgctcgtggtccattaatactagaa
gtaaactcgtctccaggtctcgaagggattgagactgcaacaggaaaaaatattgccaac
tatattatcaagtacgtagagagaaatgcctaa
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